RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 FAM27BQ5VT28 67 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 LYSMD4Q5XG99 296 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 HEPN1Q6WQI6 88 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF574Q6ZN55 896 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-203ENST00000358528 KMT5CQ86Y97 462 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 PIP4P2Q8N4L2 257 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 CLEC18CQ8NCF0 446 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 OR13D1Q8NGV5 346 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 TMEM171Q8WVE6 324 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 MALSU1Q96EH3 234 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 RPRMQ9NS64 109 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 TMEM38BQ9NVV0 291 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 HS3ST3B1Q9Y662 390 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 V9GYS6 101 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 LTBP2Q14767 1821 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 PRRC2CQ9Y520 2896 aaKnown RBP5.67□□□□□ -1.5
CSDE1-203ENST00000358528 IGHV5-10-1A0A0J9YXX1 117 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 SYNGR1O43759 233 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 HIST1H2BKO60814 126 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF737O75373 536 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 HIST1H2BJP06899 126 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 SRFP11831 508 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 LIFP15018 202 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 HIST1H2BOP23527 126 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 IL2RGP31785 369 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 HIST1H2BBP33778 126 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 PSMB3P49720 205 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 HIST1H2BDP58876 126 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 HIST1H2BCP62807 126 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 RAC1P63000 192 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 H3F3AP84243 136 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 HIST2H2BEQ16778 126 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-203ENST00000358528 CXorf67Q86X51 503 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-203ENST00000358528 SMRP1Q8NCR6 262 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 CCDC54Q8NEL0 328 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 FGFBP3Q8TAT2 258 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 HIST1H2BHQ93079 126 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 CLDN23Q96B33 292 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 MUCL1Q96DR8 90 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 GALNT14Q96FL9 552 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 HIST1H2BNQ99877 126 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 HIST1H2BMQ99879 126 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 OPA3Q9H6K4 179 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 RNF122Q9H9V4 155 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 DMRT1Q9Y5R6 373 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 MYO15AQ9UKN7 3530 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 CACNA1GO43497 2377 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 A0A1W2PQM1 296 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 CA6P23280 308 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 APLNRP35414 380 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 TGFBR3Q03167 851 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 IL15RAQ13261 267 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 PMS2P11Q13670 270 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 ELOBQ15370 118 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 C3AR1Q16581 482 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 HIKESHIQ53FT3 197 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF385CQ66K41 422 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-203ENST00000358528 OR2H1Q9GZK4 316 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 PATZ1Q9HBE1 687 aaKnown RBP5.66□□□□□ -1.5
CSDE1-203ENST00000358528 LYRM2Q9NU23 88 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-203ENST00000358528 PLA2G3Q9NZ20 509 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 PTPRSQ13332 1948 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 MUC22E2RYF6 1773 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-203ENST00000358528 PROB1E7EW31 1015 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 RRP8O43159 456 aaKnown RBP5.66□□□□□ -1.5
CSDE1-203ENST00000358528 SYNGR2O43760 224 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 NXPH2O95156 264 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 IGHV3-13P01766 116 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 IGHV3-7P01780 117 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 SOD3P08294 240 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 RAC2P15153 192 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 CCL1P22362 96 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 TAS2R30P59541 319 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 HGFACQ04756 655 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 ICAM4Q14773 271 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 SLC23A3Q6PIS1 610 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 FIP1L1Q6UN15 594 aaKnown RBP5.66□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF705AQ6ZN79 300 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-203ENST00000358528 FAM185AQ8N0U4 392 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 AGBL5Q8NDL9 886 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 IFI44Q8TCB0 444 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 GPR146Q96CH1 333 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 C18orf12Q96KH6 178 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 GPR87Q9BY21 358 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 VSIRQ9H7M9 311 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 TINAGQ9UJW2 476 aa5.66□□□□□ -1.5
CSDE1-203ENST00000358528 CHCHD2Q9Y6H1 151 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-203ENST00000358528 CEACAM18A8MTB9 384 aa5.65□□□□□ -1.5
CSDE1-203ENST00000358528 RPL36A-HNRNPH2H7BZ11 118 aa5.65□□□□□ -1.5
CSDE1-203ENST00000358528 EGR1P18146 543 aa5.65□□□□□ -1.5
CSDE1-203ENST00000358528 FKBP2P26885 142 aaKnown RBP5.65□□□□□ -1.5
CSDE1-203ENST00000358528 GALR1P47211 349 aa5.65□□□□□ -1.5
CSDE1-203ENST00000358528 IL24Q13007 206 aa5.65□□□□□ -1.5
CSDE1-203ENST00000358528 RTP5Q14D33 572 aa5.65□□□□□ -1.5
CSDE1-203ENST00000358528 TMEM211Q6ICI0 200 aa5.65□□□□□ -1.5
CSDE1-203ENST00000358528 WDR74Q6RFH5 385 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-203ENST00000358528 EDARADDQ8WWZ3 215 aa5.65□□□□□ -1.5
CSDE1-203ENST00000358528 DUSP23Q9BVJ7 150 aa5.65□□□□□ -1.5
CSDE1-203ENST00000358528 ANGPTL4Q9BY76 406 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms