RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ZNF565Q8N9K5 539 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 OR4M2Q8NGB6 313 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 CORO2AQ92828 525 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 ZNF714Q96N38 554 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 MBNL3Q9NUK0 354 aaKnown RBP12.22□□□□□ -0.45
CCNE1-202ENST00000357943 LPAR3Q9UBY5 353 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 UBE2J1Q9Y385 318 aaPredicted RBP12.22□□□□□ -0.45
CCNE1-202ENST00000357943 ZNF728P0DKX0 622 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 FOSL1P15407 271 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 SSTR5P35346 364 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 DLX1P56177 255 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 DLX6P56179 175 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 GNG2P59768 71 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 MRPS15P82914 257 aaKnown RBP12.22□□□□□ -0.45
CCNE1-202ENST00000357943 CR1LQ2VPA4 569 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 SNX29P2Q8IUI4 249 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 Q8N7P7 452 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 UBALD1Q8TB05 177 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 TMPRSS13Q9BYE2 586 aa12.22□□□□□ -0.45
CCNE1-202ENST00000357943 ZNF230Q9UIE0 474 aaPredicted RBP12.22□□□□□ -0.45
CCNE1-202ENST00000357943 WNK2Q9Y3S1 2297 aa12.21□□□□□ -0.45
CCNE1-202ENST00000357943 TLN2Q9Y4G6 2542 aa12.21□□□□□ -0.45
CCNE1-202ENST00000357943 SSX5O60225 188 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 LY6G6DO95868 133 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 FCGR3AP08637 254 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 CGB3P0DN86 165 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 CGB7P0DN87 165 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 OMGP23515 440 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 GATA3P23771 443 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 GUCA2AQ02747 115 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 PNLIPRP3Q17RR3 467 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 C17orf58Q2M2W7 97 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 ZNF880Q6PDB4 577 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 SETD6Q8TBK2 473 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 DMRTB1Q96MA1 342 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 ABHD1Q96SE0 405 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 RIMS4Q9H426 269 aaPredicted RBP12.21□□□□□ -0.46
CCNE1-202ENST00000357943 C7orf69Q9H7B7 122 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 PALMDQ9NP74 551 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 V9GYH0 126 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 KIAA2026Q5HYC2 2103 aa12.21□□□□□ -0.46
CCNE1-202ENST00000357943 DSCAML1Q8TD84 2053 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 TRBV6-6A0A0A6YYG2 114 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 KBTBD11-OT1A0A1B0GTJ5 212 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 A0A1W2PPH5 198 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 MEIOCA2RUB1 952 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 C12orf77C9JDV5 145 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 C15orf65H3BRN8 121 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 MMP23AO75900 390 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 AVPP01185 164 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 MMP9P14780 707 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 GZMHP20718 246 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 PRB3Q04118 309 aaPredicted RBP12.2□□□□□ -0.46
CCNE1-202ENST00000357943 METTL11BQ5VVY1 283 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 PRR18Q8N4B5 295 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 RFESDQ8TAC1 157 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 MAFIPQ8WZ33 124 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 SOSTQ9BQB4 213 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 SIRPDQ9H106 197 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 GSX1Q9H4S2 264 aaPredicted RBP12.2□□□□□ -0.46
CCNE1-202ENST00000357943 Q9N2K0 584 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 SIRT7Q9NRC8 400 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 TAS2R3Q9NYW6 316 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 CALYQ9NYX4 217 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 KCNS2Q9ULS6 477 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 KPTNQ9Y664 436 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 CUBNO60494 3623 aa12.2□□□□□ -0.46
CCNE1-202ENST00000357943 MEIS3P1A6NDR6 274 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 ZNF729A6NN14 1252 aaPredicted RBP12.19□□□□□ -0.46
CCNE1-202ENST00000357943 C17orf98A8MV24 154 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 M0R1W7 72 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 PITPNAQ00169 270 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 IL18Q14116 193 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 C16orf87Q6PH81 154 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 C1orf229Q6ZS94 237 aaPredicted RBP12.19□□□□□ -0.46
CCNE1-202ENST00000357943 KIR3DL3Q8N743 410 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 GVQW1Q8N7I0 195 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 ARL11Q969Q4 196 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 PCGF1Q9BSM1 259 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 GAL3ST2Q9H3Q3 398 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 TAF9BQ9HBM6 251 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 OPN4Q9UHM6 478 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 AUP1Q9Y679 476 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 F8P00451 2351 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 FABP12A6NFH5 140 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 NPIPB11E5RHQ5 1161 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 TOX4O94842 621 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 FCER2P06734 321 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 DTYMKP23919 212 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 PRSS3P35030 304 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 GDNFP39905 211 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 LTC4SQ16873 150 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 C6orf183Q5T699 404 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 PRAMEF5Q5TYX0 476 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 CLEC9AQ6UXN8 241 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 BAIAP2L2Q6UXY1 529 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 ZNF782Q6ZMW2 699 aaPredicted RBP12.19□□□□□ -0.46
CCNE1-202ENST00000357943 VMO1Q7Z5L0 202 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 TBX15Q96SF7 602 aa12.19□□□□□ -0.46
CCNE1-202ENST00000357943 SDHCQ99643 169 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms