RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 EPHA8P29322 1005 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 PTTG1IPP53801 180 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 ALKBH6Q3KRA9 238 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 DPPA3Q6W0C5 159 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 TDHQ8IZJ6 230 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 TRAV39A0A0B4J263 110 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 M0QZK8 103 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 GGCTO75223 188 aaKnown RBP13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 F2RP25116 425 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 CAMPP49913 170 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 SPCS3P61009 180 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 OR5A2Q8NGI9 324 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 OR2Y1Q8NGV0 311 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 M1APQ8TC57 530 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 PIPOXQ9P0Z9 390 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 ARID2Q68CP9 1835 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 CCL3P10147 92 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 PMELP40967 661 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 RAB7AP51149 207 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 VMA21Q3ZAQ7 101 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 FAM27BQ5VT28 67 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 Q6ZN92 141 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 OR4A4PQ8NGN8 299 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 R3HDM4Q96D70 268 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 TIMM9Q9Y5J7 89 aa13.62□□□□□ -0.23
TRAPPC11-202ENST00000357207 J3QT63 122 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 CA11O75493 328 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 HSPB1P04792 205 aaKnown RBP13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 USF1P22415 310 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 RBM11P57052 281 aaKnown RBP13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 PLPPR5Q32ZL2 321 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 WDR74Q6RFH5 385 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 NR2C2APQ86WQ0 139 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 OR5AU1Q8NGC0 362 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 ZNF596Q8TC21 504 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 BCL2L2Q92843 193 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 SOSTQ9BQB4 213 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 TMEM167BQ9NRX6 74 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 TUBD1Q9UJT1 453 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 CDIPTO14735 213 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 PGA4P0DJD7 388 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 PGA5P0DJD9 388 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 PSG2P11465 335 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 OR10J1P30954 320 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 HLA-DRB5Q30154 266 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 TIPARPQ7Z3E1 657 aaKnown RBP13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 LRRC29Q8WV35 223 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 TMEM230Q96A57 120 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 BARX1Q9HBU1 254 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 LTBP4Q8N2S1 1624 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 THSD7AQ9UPZ6 1657 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 SDK2Q58EX2 2172 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 PRRG2O14669 202 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 DNPH1O43598 174 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 SLC25A5P05141 298 aaKnown RBP13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 ZNF25P17030 456 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 HOXA6P31267 233 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 OR5I1Q13606 314 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 BTNL3Q6UXE8 466 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 LILRB1Q8NHL6 650 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 ZNF519Q8TB69 540 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 GPR35Q9HC97 309 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 CRYM-AS1A6NIL9 109 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 CYB5R3P00387 301 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 TCL1AP56279 114 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 LRP11Q86VZ4 500 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 WFDC8Q8IUA0 241 aa13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 MYOZ1Q9NP98 299 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC11-202ENST00000357207 EIF3GO75821 320 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 IGHV3-13P01766 116 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 IGHV3-7P01780 117 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 OPRK1P41145 380 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 TFF2Q03403 129 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 PDE6DO43924 150 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 GNG10P50151 68 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 OR1K1Q8NGR3 316 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 OR4S2Q8NH73 311 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 SSMEM1Q8WWF3 244 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 HIST1H2BAQ96A08 127 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 IL36GQ9NZH8 169 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 SBF2Q86WG5 1849 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 MMP9P14780 707 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 ID4P47928 161 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 FAM3BP58499 235 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 SSPNQ14714 243 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 APCDD1LQ8NCL9 501 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 HSD17B10Q99714 261 aaKnown RBP13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 TMEM222Q9H0R3 208 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 AURKAIP1Q9NWT8 199 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 DOK5Q9P104 306 aa13.6□□□□□ -0.23
TRAPPC11-202ENST00000357207 C5orf67F2Z3F1 127 aa13.59□□□□□ -0.23
TRAPPC11-202ENST00000357207 H0YL77 283 aa13.59□□□□□ -0.23
TRAPPC11-202ENST00000357207 KLK2P20151 261 aa13.59□□□□□ -0.23
TRAPPC11-202ENST00000357207 PPP1CCP36873 323 aaKnown RBP13.59□□□□□ -0.23
TRAPPC11-202ENST00000357207 C19orf35Q6ZS72 473 aa13.59□□□□□ -0.23
TRAPPC11-202ENST00000357207 OR1A1Q9P1Q5 309 aa13.59□□□□□ -0.23
TRAPPC11-202ENST00000357207 NPTNQ9Y639 398 aa13.59□□□□□ -0.23
TRAPPC11-202ENST00000357207 LYZL6O75951 148 aa13.59□□□□□ -0.23
TRAPPC11-202ENST00000357207 PRF1P14222 555 aa13.59□□□□□ -0.23
TRAPPC11-202ENST00000357207 TNFRSF1AP19438 455 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms