RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 IL2RAP01589 272 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 UBE2L3P68036 154 aaKnown RBP5.81□□□□□ -1.48
VPS13B-202ENST00000357162 HMGN2P46Q86SG4 172 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 NEUROG1Q92886 237 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 ST20Q9HBF5 79 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 RPL7P18124 248 aaKnown RBP5.81□□□□□ -1.48
VPS13B-202ENST00000357162 SEC11AP67812 179 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 PRR18Q8N4B5 295 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 CCL14Q16627 93 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 TNFRSF12AQ9NP84 129 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 YBX2Q9Y2T7 364 aaKnown RBP5.81□□□□□ -1.48
VPS13B-202ENST00000357162 KBTBD11O94819 623 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 HMGA1P17096 107 aaKnown RBP5.81□□□□□ -1.48
VPS13B-202ENST00000357162 RAB32Q13637 225 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 THAP3Q8WTV1 239 aaPredicted RBP5.81□□□□□ -1.48
VPS13B-202ENST00000357162 MRM2Q9UI43 246 aaKnown RBP5.81□□□□□ -1.48
VPS13B-202ENST00000357162 LIPGQ9Y5X9 500 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 WISP3O95389 354 aaPredicted RBP5.81□□□□□ -1.48
VPS13B-202ENST00000357162 GZMMP51124 257 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 HYAL1Q12794 435 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 SKP2Q13309 424 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 LRRC10Q5BKY1 277 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 MS4A3Q96HJ5 214 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 NXF5Q9H1B4 397 aaKnown RBP5.81□□□□□ -1.48
VPS13B-202ENST00000357162 A6NL46 340 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 FGF17O60258 216 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 GALNT14Q96FL9 552 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.81□□□□□ -1.48
VPS13B-202ENST00000357162 CRYM-AS1A6NIL9 109 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 CRYAAP02489 173 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 PSMB5P28074 263 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 AGERQ15109 404 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 MRPL32Q9BYC8 188 aaKnown RBP5.8□□□□□ -1.48
VPS13B-202ENST00000357162 C1RLQ9NZP8 487 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 AQP7O14520 342 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 PPYP01298 95 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 OPRM1P35372 400 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 ELSPBP1Q96BH3 223 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 VSIG4Q9Y279 399 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 CST7O76096 145 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 CXCL3P19876 107 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 FCER1GP30273 86 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 MICBQ29980 383 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 ZNF600Q6ZNG1 722 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 ZNF383Q8NA42 475 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 IL36GQ9NZH8 169 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 POM121BA6NF01 834 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 STARD6P59095 220 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 ZNF77Q15935 545 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 VWA1Q6PCB0 445 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 C6orf201Q7Z4U5 140 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 BEND2Q8NDZ0 799 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 PIPOXQ9P0Z9 390 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 MTCH2Q9Y6C9 303 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 TGFBR1P36897 503 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 OR1L8Q8NGR8 309 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 A6NCN8 305 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 LIMS1P48059 325 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 SLC37A2Q8TED4 501 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 GPR35Q9HC97 309 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 ICOSLGO75144 302 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 ACAA1P09110 424 aaPredicted RBP5.8□□□□□ -1.48
VPS13B-202ENST00000357162 PNLIPP16233 465 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 HPXP02790 462 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 COX5BP10606 129 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 PUSL1Q8N0Z8 303 aaKnown RBP5.8□□□□□ -1.48
VPS13B-202ENST00000357162 ZNF296Q8WUU4 475 aaPredicted RBP5.8□□□□□ -1.48
VPS13B-202ENST00000357162 ZBP1Q9H171 429 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 SRD5A3Q9H8P0 318 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 SCO1O75880 301 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 SCGB1D4Q6XE38 83 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 ATG4DQ86TL0 474 aaPredicted RBP5.8□□□□□ -1.48
VPS13B-202ENST00000357162 RDH5Q92781 318 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 ADAMTS9Q9P2N4 1935 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 ZSWIM8A7E2V4 1837 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 FFAR1O14842 300 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 AMY1AP04745 511 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 IGFBP4P22692 258 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 ZNF506Q5JVG8 444 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 KIRREL2Q6UWL6 708 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 TMPRSS9Q7Z410 1059 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 BCDIN3DQ7Z5W3 292 aaKnown RBP5.8□□□□□ -1.48
VPS13B-202ENST00000357162 MARS2Q96GW9 593 aaKnown RBP5.8□□□□□ -1.48
VPS13B-202ENST00000357162 SMIM8Q96KF7 97 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 CCL27Q9Y4X3 112 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 GLRA1P23415 457 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 OTX2P32243 289 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 PGGT1BP53609 377 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 IZUMO4Q1ZYL8 232 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 PCDH15Q96QU1 1955 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 GABRG3Q99928 467 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 RHNO1Q9BSD3 238 aa5.8□□□□□ -1.48
VPS13B-202ENST00000357162 A0A1B0GTH9 108 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 SLC25A17O43808 307 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 RHBDL1O75783 438 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 C11orf42Q8N5U0 333 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 SNRNP40Q96DI7 357 aaKnown RBP5.79□□□□□ -1.48
VPS13B-202ENST00000357162 COL5A3P25940 1745 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-202ENST00000357162 hADV38S2A0JD32 116 aa5.79□□□□□ -1.48
VPS13B-202ENST00000357162 UBE2CO00762 179 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms