RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 OSR2Q8N2R0 312 aa12.29□□□□□ -0.44
SREBF1-202ENST00000355815 GPX7Q96SL4 187 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-202ENST00000355815 NKX2-6A6NCS4 301 aa12.29□□□□□ -0.44
SREBF1-202ENST00000355815 ZNF253O75346 499 aa12.29□□□□□ -0.44
SREBF1-202ENST00000355815 CIB3Q96Q77 187 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-202ENST00000355815 TAAR9Q96RI9 348 aa12.29□□□□□ -0.44
SREBF1-202ENST00000355815 SH3BGRL3Q9H299 93 aa12.29□□□□□ -0.44
SREBF1-202ENST00000355815 TMED3Q9Y3Q3 217 aa12.29□□□□□ -0.44
SREBF1-202ENST00000355815 NDUFB7P17568 137 aa12.29□□□□□ -0.44
SREBF1-202ENST00000355815 RANP62826 216 aaKnown RBP12.29□□□□□ -0.44
SREBF1-202ENST00000355815 EWSR1Q01844 656 aaKnown RBP eCLIP12.29□□□□□ -0.448e-7■■■■□ 22.1
SREBF1-202ENST00000355815 KDF1Q8NAX2 398 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-202ENST00000355815 OR1K1Q8NGR3 316 aa12.29□□□□□ -0.44
SREBF1-202ENST00000355815 ZNF665Q9H7R5 613 aa12.29□□□□□ -0.44
SREBF1-202ENST00000355815 PLXNB3Q9ULL4 1909 aa12.29□□□□□ -0.44
SREBF1-202ENST00000355815 IGHV3-13P01766 116 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 IGHV3-7P01780 117 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 ZBTB25P24278 435 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 PNLIPRP3Q17RR3 467 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 GDF15Q99988 308 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 ALX4Q9H161 411 aaPredicted RBP12.28□□□□□ -0.44
SREBF1-202ENST00000355815 BET1LQ9NYM9 111 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 HDGFL3Q9Y3E1 203 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.28□□□□□ -0.44
SREBF1-202ENST00000355815 ZNF729A6NN14 1252 aaPredicted RBP12.28□□□□□ -0.44
SREBF1-202ENST00000355815 RNF212BA8MTL3 300 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 PRF1P14222 555 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 PCBD1P61457 104 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 IGLV3-21P80748 117 aaPredicted RBP12.28□□□□□ -0.44
SREBF1-202ENST00000355815 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.28□□□□□ -0.44
SREBF1-202ENST00000355815 OR5D13Q8NGL4 314 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 RNF133Q8WVZ7 376 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 UTP23Q9BRU9 249 aaKnown RBP12.28□□□□□ -0.44
SREBF1-202ENST00000355815 C3orf85A0A1B0GTC6 90 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 IRF2P14316 349 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 HINT1P49773 126 aaPredicted RBP12.28□□□□□ -0.44
SREBF1-202ENST00000355815 PAX5Q02548 391 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 OR11L1Q8NGX0 322 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 PCGF1Q9BSM1 259 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 WNT16Q9UBV4 365 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 A0A1W2PQD3 144 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 MPPED1O15442 326 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 SOD3P08294 240 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 GNG10P50151 68 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 SELENOVP59797 346 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 EXT1Q16394 746 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 RFESDQ8TAC1 157 aa12.28□□□□□ -0.44
SREBF1-202ENST00000355815 SNRPCP09234 159 aaKnown RBP12.27□□□□□ -0.44
SREBF1-202ENST00000355815 PLGLAQ15195 96 aa12.27□□□□□ -0.44
SREBF1-202ENST00000355815 REC114Q7Z4M0 266 aa12.27□□□□□ -0.44
SREBF1-202ENST00000355815 RSG1Q9BU20 258 aa12.27□□□□□ -0.44
SREBF1-202ENST00000355815 SRD5A3Q9H8P0 318 aa12.27□□□□□ -0.44
SREBF1-202ENST00000355815 TECRQ9NZ01 308 aaKnown RBP12.27□□□□□ -0.44
SREBF1-202ENST00000355815 DUSP13Q9UII6 198 aa12.27□□□□□ -0.44
SREBF1-202ENST00000355815 LOXL2Q9Y4K0 774 aa12.27□□□□□ -0.44
SREBF1-202ENST00000355815 PRR19A6NJB7 356 aa12.27□□□□□ -0.45
SREBF1-202ENST00000355815 FAM157BP0CG42 384 aa12.27□□□□□ -0.45
SREBF1-202ENST00000355815 ABHD3Q8WU67 409 aa12.27□□□□□ -0.45
SREBF1-202ENST00000355815 METTL1Q9UBP6 276 aaKnown RBP12.27□□□□□ -0.45
SREBF1-202ENST00000355815 ANXA10Q9UJ72 324 aa12.27□□□□□ -0.45
SREBF1-202ENST00000355815 BOKQ9UMX3 212 aaPredicted RBP12.27□□□□□ -0.45
SREBF1-202ENST00000355815 SLC38A11Q08AI6 406 aa12.27□□□□□ -0.45
SREBF1-202ENST00000355815 ANKRD55Q3KP44 614 aa12.27□□□□□ -0.45
SREBF1-202ENST00000355815 RBMXL3Q8N7X1 1067 aaKnown RBP12.27□□□□□ -0.45
SREBF1-202ENST00000355815 ADPRHL1Q8NDY3 354 aa12.27□□□□□ -0.45
SREBF1-202ENST00000355815 CBR3O75828 277 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 PLPPR5Q32ZL2 321 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 MRPL54Q6P161 138 aaKnown RBP12.26□□□□□ -0.45
SREBF1-202ENST00000355815 FAHD2BQ6P2I3 314 aaPredicted RBP12.26□□□□□ -0.45
SREBF1-202ENST00000355815 DHRS13Q6UX07 377 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 RPS4Y2Q8TD47 263 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 MSI2Q96DH6 328 aaKnown RBP12.26□□□□□ -0.45
SREBF1-202ENST00000355815 FAHD2AQ96GK7 314 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 P4HTMQ9NXG6 502 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 ZNF814B7Z6K7 855 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 TMEM127O75204 238 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 CSN3P07498 182 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 NAAAQ02083 359 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 LRRC75AQ8NAA5 344 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 C22orf15Q8WYQ4 148 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 NTNG2Q96CW9 530 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 HSPB9Q9BQS6 159 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 PAGE4O60829 102 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 VAMP5O95183 116 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 IL13RA2Q14627 380 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 WDR74Q6RFH5 385 aaPredicted RBP12.26□□□□□ -0.45
SREBF1-202ENST00000355815 ERASQ7Z444 233 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 OR2M3Q8NG83 312 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 FOXB1Q99853 325 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 Q9N2K0 584 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 COL6A6A6NMZ7 2263 aa12.26□□□□□ -0.45
SREBF1-202ENST00000355815 TRBV5-7A0A0A0MS05 114 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 A0A0J9YW62 118 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 DUXBA0A1W2PPF3 345 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 HSPB2A8KAH6 182 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 OR5G3P0C626 314 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 FUT3P21217 361 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 PRDX4Q13162 271 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 HSPB2Q16082 182 aa12.25□□□□□ -0.45
SREBF1-202ENST00000355815 KHDC3LQ587J8 217 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms