RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 TRDCB7Z8K6 153 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 H3BQ15 152 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 C1QL1O75973 258 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 ZNF90Q03938 601 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 SLC38A11Q08AI6 406 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 SPNS3Q6ZMD2 512 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 C1orf174Q8IYL3 243 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 OR10V1Q8NGI7 309 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 AQP10Q96PS8 301 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 ATP5SQ99766 215 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 V9GYS6 101 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 ST8SIA5O15466 376 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 CD59P13987 128 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 CA6P23280 308 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 DTYMKP23919 212 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 CEACAM6P40199 344 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 FDCSPQ8NFU4 85 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 CCL28Q9NRJ3 127 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 RCC2Q9P258 522 aaKnown RBP10.71□□□□□ -0.69
COLCA1-201ENST00000355430 ZNF574Q6ZN55 896 aaPredicted RBP10.71□□□□□ -0.7
COLCA1-201ENST00000355430 GLRX5Q86SX6 157 aa10.71□□□□□ -0.7
COLCA1-201ENST00000355430 TMEM18Q96B42 140 aa10.71□□□□□ -0.7
COLCA1-201ENST00000355430 BORCS7Q96B45 105 aa10.71□□□□□ -0.7
COLCA1-201ENST00000355430 GAL3ST2Q9H3Q3 398 aa10.71□□□□□ -0.7
COLCA1-201ENST00000355430 KCNIP2Q9NS61 270 aa10.71□□□□□ -0.7
COLCA1-201ENST00000355430 ZNF737O75373 536 aa10.71□□□□□ -0.7
COLCA1-201ENST00000355430 FCGR3AP08637 254 aa10.71□□□□□ -0.7
COLCA1-201ENST00000355430 GALR1P47211 349 aa10.71□□□□□ -0.7
COLCA1-201ENST00000355430 IL24Q13007 206 aa10.71□□□□□ -0.7
COLCA1-201ENST00000355430 UNC119Q13432 240 aa10.71□□□□□ -0.7
COLCA1-201ENST00000355430 ZNF66Q6ZN08 573 aa10.71□□□□□ -0.7
COLCA1-201ENST00000355430 CXorf67Q86X51 503 aaPredicted RBP10.71□□□□□ -0.7
COLCA1-201ENST00000355430 SPACA3Q8IXA5 215 aa10.71□□□□□ -0.7
COLCA1-201ENST00000355430 FAM58AQ8N1B3 248 aa10.71□□□□□ -0.7
COLCA1-201ENST00000355430 BARX1Q9HBU1 254 aaPredicted RBP10.71□□□□□ -0.7
COLCA1-201ENST00000355430 IGHMP01871 453 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 CELA2AP08217 269 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 MOB3BQ86TA1 216 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 SHISA5Q8N114 240 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 ABHD3Q8WU67 409 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 LRRC29Q8WV35 223 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 TMEM37Q8WXS4 190 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 PINX1Q96BK5 328 aaKnown RBP10.7□□□□□ -0.7
COLCA1-201ENST00000355430 SFXN3Q9BWM7 321 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 CABIN1Q9Y6J0 2220 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 AQP7O14520 342 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 CST2P09228 141 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 ATP6V0CP27449 155 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 GPR6P46095 362 aaPredicted RBP10.7□□□□□ -0.7
COLCA1-201ENST00000355430 FFAR4Q5NUL3 377 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 POC1BQ8TC44 478 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 RPEQ96AT9 228 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 FAM3AP98173 230 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 ADAMTS17Q8TE56 1095 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 GALMQ96C23 342 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 DIRC2Q96SL1 478 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 TMEM30CPA0ZSE6 113 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 MBPP02686 304 aaPredicted RBP10.7□□□□□ -0.7
COLCA1-201ENST00000355430 ARL3P36405 182 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 PRRX1P54821 245 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 TMEM241Q24JQ0 296 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 MPV17LQ2QL34 196 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 FLVCR1-AS1Q8TAF5 88 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 CORO2AQ92828 525 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 CIB3Q96Q77 187 aaPredicted RBP10.7□□□□□ -0.7
COLCA1-201ENST00000355430 SLC25A22Q9H936 323 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 GPR27Q9NS67 375 aa10.7□□□□□ -0.7
COLCA1-201ENST00000355430 hADV38S2A0JD32 116 aa10.69□□□□□ -0.7
COLCA1-201ENST00000355430 RNF222A6NCQ9 220 aa10.69□□□□□ -0.7
COLCA1-201ENST00000355430 DNASE2O00115 360 aaPredicted RBP10.69□□□□□ -0.7
COLCA1-201ENST00000355430 SLC25A47Q6Q0C1 308 aa10.69□□□□□ -0.7
COLCA1-201ENST00000355430 ASCL5Q7RTU5 278 aa10.69□□□□□ -0.7
COLCA1-201ENST00000355430 TAAR6Q96RI8 345 aa10.69□□□□□ -0.7
COLCA1-201ENST00000355430 FAM103A1Q9BTL3 118 aaKnown RBP10.69□□□□□ -0.7
COLCA1-201ENST00000355430 NCBP2LA6PVI3 153 aaKnown RBP10.69□□□□□ -0.7
COLCA1-201ENST00000355430 TMEM14DPA8MWL7 114 aa10.69□□□□□ -0.7
COLCA1-201ENST00000355430 HSBP1L1C9JCN9 74 aa10.69□□□□□ -0.7
COLCA1-201ENST00000355430 GAPDHP04406 335 aaKnown RBP10.69□□□□□ -0.7
COLCA1-201ENST00000355430 TMEM50BP56557 158 aa10.69□□□□□ -0.7
COLCA1-201ENST00000355430 MEX3AA1L020 520 aaKnown RBP10.69□□□□□ -0.7
COLCA1-201ENST00000355430 SMPD2O60906 423 aa10.69□□□□□ -0.7
COLCA1-201ENST00000355430 SPINK9Q5DT21 86 aa10.69□□□□□ -0.7
COLCA1-201ENST00000355430 OR2H1Q9GZK4 316 aa10.69□□□□□ -0.7
COLCA1-201ENST00000355430 SLC7A10Q9NS82 523 aa10.69□□□□□ -0.7
COLCA1-201ENST00000355430 XKRY2A2RUG3 117 aa10.69□□□□□ -0.7
COLCA1-201ENST00000355430 SEC14L6B5MCN3 397 aa10.69□□□□□ -0.7
COLCA1-201ENST00000355430 BMI1P35226 326 aa10.69□□□□□ -0.7
COLCA1-201ENST00000355430 PPP1R32Q7Z5V6 425 aa10.69□□□□□ -0.7
COLCA1-201ENST00000355430 TDRD6O60522 2096 aaKnown RBP10.69□□□□□ -0.7
COLCA1-201ENST00000355430 MSGN1A6NI15 193 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 G3V3Q6 166 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 YIF1AO95070 293 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 ERVS71-1P61550 626 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 TRAT1Q6PIZ9 186 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 BTNL8Q6UX41 500 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 GPR35Q9HC97 309 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 MPC1Q9Y5U8 109 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 IGKV1D-43A0A0B4J1Z2 117 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 A1L4Q6 167 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 BRS3P32247 399 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms