RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 KCNIP1Q9NZI2 227 aa12.99□□□□□ -0.33
CTSA-202ENST00000354880 ODAMA1E959 279 aa12.98□□□□□ -0.33
CTSA-202ENST00000354880 OVOL3O00110 214 aa12.98□□□□□ -0.33
CTSA-202ENST00000354880 MECP2P51608 486 aaKnown RBP12.98□□□□□ -0.33
CTSA-202ENST00000354880 P2RX3P56373 397 aa12.98□□□□□ -0.33
CTSA-202ENST00000354880 EDDM3BP56851 147 aa12.98□□□□□ -0.33
CTSA-202ENST00000354880 HMGN3Q15651 99 aa12.98□□□□□ -0.33
CTSA-202ENST00000354880 TMPRSS13Q9BYE2 586 aa12.98□□□□□ -0.33
CTSA-202ENST00000354880 KAAG1Q9UBP8 84 aa12.98□□□□□ -0.33
CTSA-202ENST00000354880 PCDHB10Q9UN67 800 aa12.98□□□□□ -0.33
CTSA-202ENST00000354880 HELZ2Q9BYK8 2649 aaKnown RBP12.98□□□□□ -0.33
CTSA-202ENST00000354880 IGKV1-6A0A0C4DH72 117 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 OR5H14A6NHG9 310 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 CEACAM18A8MTB9 384 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 ADAM20O43506 726 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 F12P00748 615 aaPredicted RBP12.97□□□□□ -0.33
CTSA-202ENST00000354880 IGHV2-70P01814 119 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 ANXA7P20073 488 aaKnown RBP12.97□□□□□ -0.33
CTSA-202ENST00000354880 ERP29P30040 261 aaKnown RBP12.97□□□□□ -0.33
CTSA-202ENST00000354880 FCGR2CP31995 323 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 NPY4RP50391 375 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 C6orf183Q5T699 404 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 PRR18Q8N4B5 295 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 ZDHHC22Q8N966 263 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 OR13A1Q8NGR1 328 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 MARCH1Q8TCQ1 289 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 MRGPRDQ8TDS7 321 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 GIMAP1Q8WWP7 306 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 IGFBPL1Q8WX77 278 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 KIRREL1Q96J84 757 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 CABLES2Q9BTV7 478 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 BEX2Q9BXY8 128 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 LIME1Q9H400 295 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 NCOR1P1Q9H4R4 102 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 CHODLQ9H9P2 273 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 BEX1Q9HBH7 125 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 VSIG4Q9Y279 399 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 ALG5Q9Y673 324 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 CELSR2Q9HCU4 2923 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 C12orf77C9JDV5 145 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 NDUFS7O75251 213 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 EFNA4P52798 201 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 LYPD2Q6UXB3 125 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 ZNF554Q86TJ5 538 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 ZNF565Q8N9K5 539 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 IL1F10Q8WWZ1 152 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 TIMD4Q96H15 378 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 LURAP1Q96LR2 239 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 SCGB3A2Q96PL1 93 aa12.97□□□□□ -0.33
CTSA-202ENST00000354880 SLC25A10Q9UBX3 287 aaPredicted RBP12.97□□□□□ -0.33
CTSA-202ENST00000354880 TRBV6-7A0A0A0MS04 114 aa12.96□□□□□ -0.33
CTSA-202ENST00000354880 PRAF2O60831 178 aa12.96□□□□□ -0.33
CTSA-202ENST00000354880 NFYAP23511 347 aaPredicted RBP12.96□□□□□ -0.33
CTSA-202ENST00000354880 ECI1P42126 302 aa12.96□□□□□ -0.33
CTSA-202ENST00000354880 CARTPTQ16568 116 aa12.96□□□□□ -0.33
CTSA-202ENST00000354880 TRAT1Q6PIZ9 186 aa12.96□□□□□ -0.33
CTSA-202ENST00000354880 TMED4Q7Z7H5 227 aa12.96□□□□□ -0.33
CTSA-202ENST00000354880 MUC20Q8N307 709 aaPredicted RBP12.96□□□□□ -0.33
CTSA-202ENST00000354880 OR10J5Q8NHC4 309 aa12.96□□□□□ -0.33
CTSA-202ENST00000354880 RAB1CQ92928 201 aa12.96□□□□□ -0.33
CTSA-202ENST00000354880 CCL19Q99731 98 aa12.96□□□□□ -0.33
CTSA-202ENST00000354880 OR6C3Q9NZP0 311 aa12.96□□□□□ -0.33
CTSA-202ENST00000354880 CENPEQ02224 2701 aa12.96□□□□□ -0.34
CTSA-202ENST00000354880 DSCAML1Q8TD84 2053 aa12.96□□□□□ -0.34
CTSA-202ENST00000354880 PPIHO43447 177 aaKnown RBP12.95□□□□□ -0.34
CTSA-202ENST00000354880 DIRAS3O95661 229 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 NDUFB7P17568 137 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 GZMHP20718 246 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 FPR2P25090 351 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 TMEM33P57088 247 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 SURF2Q15527 256 aaPredicted RBP12.95□□□□□ -0.34
CTSA-202ENST00000354880 LRRC10Q5BKY1 277 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 AVPI1Q5T686 147 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 UBALD1Q8TB05 177 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 GALMQ96C23 342 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 C14orf79Q96F83 325 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 DCTN5Q9BTE1 182 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 ALX4Q9H161 411 aaPredicted RBP12.95□□□□□ -0.34
CTSA-202ENST00000354880 GPR132Q9UNW8 380 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 A0A0A6YYJ9 748 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 MEX3AA1L020 520 aaKnown RBP12.95□□□□□ -0.34
CTSA-202ENST00000354880 C7orf66A4D0T2 115 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 NPIPB11E5RHQ5 1161 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 NDUFB3O43676 98 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 PPYP01298 95 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 AADACP22760 399 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 SSTR5P35346 364 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 BAMBIQ13145 260 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 CR1LQ2VPA4 569 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 METTL11BQ5VVY1 283 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 GLDNQ6ZMI3 551 aaPredicted RBP12.95□□□□□ -0.34
CTSA-202ENST00000354880 ZNF295-AS1Q8N0V1 137 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 FGFRL1Q8N441 504 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 OR1L1Q8NH94 360 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 ARL11Q969Q4 196 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 DACT3Q96B18 629 aaPredicted RBP12.95□□□□□ -0.34
CTSA-202ENST00000354880 MOB3AQ96BX8 217 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 CTSZQ9UBR2 303 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 SLC23A1Q9UHI7 598 aa12.95□□□□□ -0.34
CTSA-202ENST00000354880 OPN4Q9UHM6 478 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms