RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 ZNF414Q96IQ9 312 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 PDCD10Q9BUL8 212 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 GGTLC1Q9BX51 225 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 TSSK6Q9BXA6 273 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 FAM96AQ9H5X1 160 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 C11orf49Q9H6J7 331 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 C8orf4Q9NR00 106 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 TNFRSF19Q9NS68 423 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 RWDD2AQ9UIY3 292 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 BTRCQ9Y297 605 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ACOT9Q9Y305 439 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 CFAP46Q8IYW2 2715 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ARHGAP21Q5T5U3 1957 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 KIF24Q5T7B8 1368 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 CHD7Q9P2D1 2997 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 FAM208AQ9UK61 1670 aaKnown RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 GVINP1Q7Z2Y8 2422 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 TINCRA0A1B0GVN0 87 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 A6NDN8 102 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 BIRC5O15392 142 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 GCM2O75603 506 aaPredicted RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 DEXIO95424 95 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF688P0C7X2 276 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 REG1BP48304 166 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 MTPNP58546 118 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 RAP1AP62834 184 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 BTN3A2P78410 334 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 PRDX1Q06830 199 aaKnown RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 SMAGPQ0VAQ4 97 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 PSG7Q13046 419 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 DMC1Q14565 340 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 TMED2Q15363 201 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF79Q15937 498 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 HIGD2BQ4VC39 106 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 TTC32Q5I0X7 151 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 PLEKHG7Q6ZR37 379 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 FAM92BQ6ZTR7 304 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 FAM19A3Q7Z5A8 133 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 GTSCR1Q86UQ5 136 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 UBALD2Q8IYN6 164 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 SLC35F6Q8N357 371 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 Q8N976 141 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF555Q8NEP9 628 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 OR1J4Q8NGS1 313 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 UBA3Q8TBC4 463 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 NT5CQ8TCD5 201 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 KCTD4Q8WVF5 259 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 CPNE4Q96A23 557 aaPredicted RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 MAGOHBQ96A72 148 aaKnown RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 NTAN1Q96AB6 310 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 CEP170P1Q96L14 293 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 TMED9Q9BVK6 235 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ASB7Q9H672 318 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 HEBP1Q9NRV9 189 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 AP3M1Q9Y2T2 418 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 LRRC42Q9Y546 428 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ENPP4Q9Y6X5 453 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ANKRD36BQ8N2N9 1353 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 MTORP42345 2549 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF518AQ6AHZ1 1483 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 TGIF2-C20orf24A0A0A6YYL0 155 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 A0A1B0GVX0 72 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 EXOC1LA0A1B0GW35 172 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 C9J4A7 227 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 H0Y980 276 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF593O00488 134 aaPredicted RBP1.1□□□□□ -2.23
BRCA1-202ENST00000354071 GPR171O14626 319 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 PFDN6O15212 129 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 RGS5O15539 181 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 SRSF10O75494 262 aaKnown RBP1.1□□□□□ -2.23
BRCA1-202ENST00000354071 CTDNEP1O95476 244 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 PCCAP05165 728 aaPredicted RBP1.1□□□□□ -2.23
BRCA1-202ENST00000354071 SMIM10L1P0DMW3 83 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF823P16415 610 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 RAB3AP20336 220 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 LGALS7P47929 136 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 MAGOHP61326 146 aaKnown RBP1.1□□□□□ -2.23
BRCA1-202ENST00000354071 DEFA6Q01524 100 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 PRPSAP1Q14558 356 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 AKIRIN2Q53H80 203 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 SMUG1Q53HV7 270 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 FAM222AQ5U5X8 452 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 TTC33Q6PID6 262 aaPredicted RBP1.1□□□□□ -2.23
BRCA1-202ENST00000354071 H2AFVQ71UI9 128 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 C10orf107Q8IVU9 208 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF786Q8N393 782 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 C19orf18Q8NEA5 215 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 OR5M1Q8NGP8 315 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 CIRBP-AS1Q8TBR5 109 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 DYNC2LI1Q8TCX1 351 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 RASSF5Q8WWW0 418 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF799Q96GE5 643 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 SMIM10Q96HG1 83 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 DOK1Q99704 481 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 C6orf50Q9HD87 102 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 EXOSC4Q9NPD3 245 aaKnown RBP1.1□□□□□ -2.23
BRCA1-202ENST00000354071 C8orf17Q9NRJ1 99 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 SCN3BQ9NY72 215 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 TFR2Q9UP52 801 aa1.1□□□□□ -2.23
BRCA1-202ENST00000354071 CBY1Q9Y3M2 126 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms