RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 MMP24Q9Y5R2 645 aa20.96■□□□□ 0.95
CPNE1-202ENST00000352393 WSB1Q9Y6I7 421 aa20.96■□□□□ 0.95
CPNE1-202ENST00000352393 A0A0G2JRQ6 117 aa20.95■□□□□ 0.94
CPNE1-202ENST00000352393 TRAPPC2LH3BP13 241 aa20.95■□□□□ 0.94
CPNE1-202ENST00000352393 TLE4Q04727 773 aa20.95■□□□□ 0.94
CPNE1-202ENST00000352393 NCMAPQ5T1S8 102 aa20.95■□□□□ 0.94
CPNE1-202ENST00000352393 MKXQ8IYA7 352 aa20.95■□□□□ 0.94
CPNE1-202ENST00000352393 GTF3AQ92664 365 aaKnown RBP20.95■□□□□ 0.94
CPNE1-202ENST00000352393 MIOXQ9UGB7 285 aa20.95■□□□□ 0.94
CPNE1-202ENST00000352393 ZNHIT1O43257 154 aa20.95■□□□□ 0.94
CPNE1-202ENST00000352393 TNFSF12O43508 249 aa20.95■□□□□ 0.94
CPNE1-202ENST00000352393 HBE1P02100 147 aa20.95■□□□□ 0.94
CPNE1-202ENST00000352393 CCL2P13500 99 aa20.95■□□□□ 0.94
CPNE1-202ENST00000352393 CCNOP22674 350 aa20.95■□□□□ 0.94
CPNE1-202ENST00000352393 F2RP25116 425 aa20.95■□□□□ 0.94
CPNE1-202ENST00000352393 RPS10P46783 165 aaKnown RBP20.95■□□□□ 0.94
CPNE1-202ENST00000352393 DLK1P80370 383 aa20.95■□□□□ 0.94
CPNE1-202ENST00000352393 KIAA0141Q14154 515 aaPredicted RBP20.95■□□□□ 0.94
CPNE1-202ENST00000352393 TRBV6-6A0A0A6YYG2 114 aa20.94■□□□□ 0.94
CPNE1-202ENST00000352393 C5orf49A4QMS7 147 aa20.94■□□□□ 0.94
CPNE1-202ENST00000352393 FBP1P09467 338 aa20.94■□□□□ 0.94
CPNE1-202ENST00000352393 COX5BP10606 129 aa20.94■□□□□ 0.94
CPNE1-202ENST00000352393 S100PP25815 95 aa20.94■□□□□ 0.94
CPNE1-202ENST00000352393 CEBPGP53567 150 aa20.94■□□□□ 0.94
CPNE1-202ENST00000352393 ELOBQ15370 118 aa20.94■□□□□ 0.94
CPNE1-202ENST00000352393 Q8WTZ3 238 aa20.94■□□□□ 0.94
CPNE1-202ENST00000352393 APOBEC3DQ96AK3 386 aaPredicted RBP20.94■□□□□ 0.94
CPNE1-202ENST00000352393 RIMS4Q9H426 269 aaPredicted RBP20.94■□□□□ 0.94
CPNE1-202ENST00000352393 A0A096LPE4 126 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 A0A1W2PPZ6 126 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 SYNGR1O43759 233 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 HLA-HP01893 362 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 TVP23CQ96ET8 276 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 FREM1Q5H8C1 2179 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 TRAV1-1A0A0B4J248 108 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 ZNF503-AS2A6NEH8 195 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 KIAA1324LA8MWY0 1029 aaPredicted RBP20.93■□□□□ 0.94
CPNE1-202ENST00000352393 DFFBO76075 338 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 SLC25A6P12236 298 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 HOXA5P20719 270 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 KHDC3LQ587J8 217 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 C9orf135Q5VTT2 229 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 ZNF324BQ6AW86 544 aaPredicted RBP20.93■□□□□ 0.94
CPNE1-202ENST00000352393 C20orf204Q6ZNR8 217 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 LINC00596Q86U02 117 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 STX12Q86Y82 276 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 PRRG4Q9BZD6 226 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 CALHM2Q9HA72 323 aa20.93■□□□□ 0.94
CPNE1-202ENST00000352393 LOC102723971A0A1B0GUV8 181 aa20.92■□□□□ 0.94
CPNE1-202ENST00000352393 CYB561P49447 251 aa20.92■□□□□ 0.94
CPNE1-202ENST00000352393 DUSP3P51452 185 aaPredicted RBP20.92■□□□□ 0.94
CPNE1-202ENST00000352393 RAB2AP61019 212 aa20.92■□□□□ 0.94
CPNE1-202ENST00000352393 ZNF343Q6P1L6 599 aa20.92■□□□□ 0.94
CPNE1-202ENST00000352393 SLC35E3Q7Z769 313 aa20.92■□□□□ 0.94
CPNE1-202ENST00000352393 OR10G4Q8NGN3 311 aa20.92■□□□□ 0.94
CPNE1-202ENST00000352393 GPR146Q96CH1 333 aa20.92■□□□□ 0.94
CPNE1-202ENST00000352393 NIPSNAP3BQ9BS92 247 aa20.92■□□□□ 0.94
CPNE1-202ENST00000352393 ZNF552Q9H707 407 aaPredicted RBP20.92■□□□□ 0.94
CPNE1-202ENST00000352393 SIRT7Q9NRC8 400 aa20.92■□□□□ 0.94
CPNE1-202ENST00000352393 A0A1B0GU03 582 aa20.92■□□□□ 0.94
CPNE1-202ENST00000352393 CXorf65A6NEN9 183 aa20.92■□□□□ 0.94
CPNE1-202ENST00000352393 CXCL1P09341 107 aa20.92■□□□□ 0.94
CPNE1-202ENST00000352393 ZNF880Q6PDB4 577 aa20.92■□□□□ 0.94
CPNE1-202ENST00000352393 H1FOOQ8IZA3 346 aaPredicted RBP20.92■□□□□ 0.94
CPNE1-202ENST00000352393 OR5A2Q8NGI9 324 aa20.92■□□□□ 0.94
CPNE1-202ENST00000352393 OR2W1Q9Y3N9 320 aa20.92■□□□□ 0.94
CPNE1-202ENST00000352393 IGHV2-70P01814 119 aa20.91■□□□□ 0.94
CPNE1-202ENST00000352393 WNT2P09544 360 aa20.91■□□□□ 0.94
CPNE1-202ENST00000352393 HOXA6P31267 233 aa20.91■□□□□ 0.94
CPNE1-202ENST00000352393 FOXG1P55316 489 aaPredicted RBP20.91■□□□□ 0.94
CPNE1-202ENST00000352393 RPL23AP62750 156 aaKnown RBP20.91■□□□□ 0.94
CPNE1-202ENST00000352393 LURAP1LQ8IV03 231 aa20.91■□□□□ 0.94
CPNE1-202ENST00000352393 KMT2EQ8IZD2 1858 aa20.91■□□□□ 0.94
CPNE1-202ENST00000352393 CABLES2Q9BTV7 478 aa20.91■□□□□ 0.94
CPNE1-202ENST00000352393 PLK3Q9H4B4 646 aa20.91■□□□□ 0.94
CPNE1-202ENST00000352393 ERVFRD-1P60508 538 aa20.9■□□□□ 0.94
CPNE1-202ENST00000352393 HLA-DRB3P79483 266 aa20.9■□□□□ 0.94
CPNE1-202ENST00000352393 EDARADDQ8WWZ3 215 aa20.9■□□□□ 0.94
CPNE1-202ENST00000352393 COL27A1Q8IZC6 1860 aaPredicted RBP20.9■□□□□ 0.94
CPNE1-202ENST00000352393 DOCK10Q96BY6 2186 aa20.9■□□□□ 0.94
CPNE1-202ENST00000352393 IFITM10A6NMD0 228 aa20.9■□□□□ 0.94
CPNE1-202ENST00000352393 SERPINA7P05543 415 aa20.9■□□□□ 0.94
CPNE1-202ENST00000352393 S100GP29377 79 aa20.9■□□□□ 0.94
CPNE1-202ENST00000352393 RAB40CQ96S21 281 aa20.9■□□□□ 0.94
CPNE1-202ENST00000352393 BOKQ9UMX3 212 aaPredicted RBP20.9■□□□□ 0.94
CPNE1-202ENST00000352393 H3BP45 60 aa20.89■□□□□ 0.94
CPNE1-202ENST00000352393 YIF1AO95070 293 aa20.89■□□□□ 0.94
CPNE1-202ENST00000352393 F10P00742 488 aa20.89■□□□□ 0.94
CPNE1-202ENST00000352393 GLIPR1P48060 266 aa20.89■□□□□ 0.94
CPNE1-202ENST00000352393 LHX2P50458 406 aa20.89■□□□□ 0.94
CPNE1-202ENST00000352393 TMEM267Q0VDI3 215 aaPredicted RBP20.89■□□□□ 0.94
CPNE1-202ENST00000352393 FAM209BQ5JX69 171 aa20.89■□□□□ 0.94
CPNE1-202ENST00000352393 THNSL2Q86YJ6 484 aa20.89■□□□□ 0.94
CPNE1-202ENST00000352393 OR5P3Q8WZ94 311 aa20.89■□□□□ 0.94
CPNE1-202ENST00000352393 TOLLIPQ9H0E2 274 aa20.89■□□□□ 0.94
CPNE1-202ENST00000352393 TRAV24A0A0B4J272 114 aa20.89■□□□□ 0.93
CPNE1-202ENST00000352393 PIGBOS1A0A0B4J2F0 54 aa20.89■□□□□ 0.93
CPNE1-202ENST00000352393 PATE3B3GLJ2 98 aa20.89■□□□□ 0.93
CPNE1-202ENST00000352393 B4E171 279 aa20.89■□□□□ 0.93
CPNE1-202ENST00000352393 NGFP01138 241 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms