RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 TGIF2LXQ8IUE1 241 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 FAHD2AQ96GK7 314 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 GINS3Q9BRX5 216 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 NLRC5Q86WI3 1866 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 IGF2P01344 180 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 FAM201AQ5SY85 155 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 C10orf128Q5T292 105 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 LEAP2Q969E1 77 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 MRPL24Q96A35 216 aaKnown RBP11.81□□□□□ -0.52
SMC6-201ENST00000351948 R3HDM4Q96D70 268 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 DOK5Q9P104 306 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 OR1A1Q9P1Q5 309 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 FER1L5A0AVI2 2057 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 HLA-DQB1P01920 261 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 FABP1P07148 127 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 FCGR3AP08637 254 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 LYZL2Q7Z4W2 148 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 RXFP4Q8TDU9 374 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 PIGMQ9H3S5 423 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 CHODLQ9H9P2 273 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 HILPDAQ9Y5L2 63 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 INSIG2Q9Y5U4 225 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 MPC2O95563 127 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 S100A7P31151 101 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 G6PCP35575 357 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 CEACAM3P40198 252 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 KLF9Q13886 244 aaPredicted RBP11.81□□□□□ -0.52
SMC6-201ENST00000351948 GABRA6Q16445 453 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 LINC00114Q6XXX2 140 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 RBPMSQ93062 196 aaKnown RBP11.81□□□□□ -0.52
SMC6-201ENST00000351948 TMEM56Q96MV1 263 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 RAB18Q9NP72 206 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 F6UZH7 168 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 WNT9BO14905 357 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 GSTZ1O43708 216 aaPredicted RBP11.81□□□□□ -0.52
SMC6-201ENST00000351948 EFNA2O43921 213 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 CRYBA1P05813 215 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 CTSDP07339 412 aaPredicted RBP11.81□□□□□ -0.52
SMC6-201ENST00000351948 SLC25A4P12235 298 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 ZNF787Q6DD87 383 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 SF3B6Q9Y3B4 125 aaKnown RBP11.81□□□□□ -0.52
SMC6-201ENST00000351948 OR2W1Q9Y3N9 320 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 TSC2P49815 1807 aa11.81□□□□□ -0.52
SMC6-201ENST00000351948 PTPRDP23468 1912 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 MDFIC2A0A1B0GVS7 189 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 LRRC3CA6NJW4 275 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 COX7A2P2O60397 106 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 COX5AP20674 150 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 FGF12P61328 243 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 NAAAQ02083 359 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 CLEC12BQ2HXU8 276 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 SLC25A38Q96DW6 304 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 WNK2Q9Y3S1 2297 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 SHISA3A0PJX4 238 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 F2RL2O00254 374 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 IGHMP01871 453 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 FSTP19883 344 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 ETV3LQ6ZN32 361 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 BMPERQ8N8U9 685 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 ISG15P05161 165 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 IGHV1-2P23083 117 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 ZBTB37Q5TC79 503 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 ACSM6Q6P461 480 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 OR4S2Q8NH73 311 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 TVP23CQ96ET8 276 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 SPRR3Q9UBC9 169 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 ZNF835Q9Y2P0 537 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 CTDSPLO15194 276 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 TAGLN2P37802 199 aaKnown RBP11.8□□□□□ -0.52
SMC6-201ENST00000351948 ACOT6Q3I5F7 207 aaPredicted RBP11.8□□□□□ -0.52
SMC6-201ENST00000351948 RPUSD3Q6P087 351 aaKnown RBP11.8□□□□□ -0.52
SMC6-201ENST00000351948 LRRC75AQ8NAA5 344 aa11.8□□□□□ -0.52
SMC6-201ENST00000351948 ACTR3CQ9C0K3 210 aaPredicted RBP11.8□□□□□ -0.52
SMC6-201ENST00000351948 MPDZO75970 2070 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 PSG2P11465 335 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 RPL35P42766 123 aaKnown RBP11.79□□□□□ -0.52
SMC6-201ENST00000351948 FOXG1P55316 489 aaPredicted RBP11.79□□□□□ -0.52
SMC6-201ENST00000351948 UBE2G1P62253 170 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 SLC38A11Q08AI6 406 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 H3F3CQ6NXT2 135 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 BCL2L11O43521 198 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 FNDC7Q5VTL7 733 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 MUC15Q8N387 334 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 FAM57AQ8TBR7 257 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 TANC1Q9C0D5 1861 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 IGHV3-21A0A0B4J1V1 117 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 NKX2-6A6NCS4 301 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 HBZP02008 142 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 C1QL2Q7Z5L3 287 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 HARBI1Q96MB7 349 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 PPP1R3EQ9H7J1 279 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 BIN3Q9NQY0 253 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 CA10Q9NS85 328 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 UQCC1Q9NVA1 299 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 NUBP1P53384 320 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 FLI1Q01543 452 aaPredicted RBP11.79□□□□□ -0.52
SMC6-201ENST00000351948 CLEC2AQ6UVW9 174 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 CORO2AQ92828 525 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 PRDM14Q9GZV8 571 aa11.79□□□□□ -0.52
SMC6-201ENST00000351948 ANAPC1Q9H1A4 1944 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms