RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 IRF3Q14653 427 aa9.79□□□□□ -0.84
SMARCE1-202ENST00000348513 DGAT2L6Q6ZPD8 337 aa9.79□□□□□ -0.84
SMARCE1-202ENST00000348513 OR2Z1Q8NG97 314 aa9.79□□□□□ -0.84
SMARCE1-202ENST00000348513 OR4C3Q8NH37 302 aa9.79□□□□□ -0.84
SMARCE1-202ENST00000348513 PCGF1Q9BSM1 259 aa9.79□□□□□ -0.84
SMARCE1-202ENST00000348513 SPINK4O60575 86 aa9.79□□□□□ -0.84
SMARCE1-202ENST00000348513 SPINK2P20155 84 aa9.79□□□□□ -0.84
SMARCE1-202ENST00000348513 C1orf194Q5T5A4 169 aa9.79□□□□□ -0.84
SMARCE1-202ENST00000348513 C1QL4Q86Z23 238 aa9.79□□□□□ -0.84
SMARCE1-202ENST00000348513 OR10G8Q8NGN5 311 aa9.79□□□□□ -0.84
SMARCE1-202ENST00000348513 PTPMT1Q8WUK0 201 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-202ENST00000348513 SRD5A3Q9H8P0 318 aa9.79□□□□□ -0.84
SMARCE1-202ENST00000348513 SNURFLB1AK76 121 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 HSPB1P04792 205 aaKnown RBP9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 TMEM249Q2WGJ8 235 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 PYY3Q5JQD4 70 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 PWWP2BQ6NUJ5 590 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 SPRED2Q7Z698 418 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 DTWD2Q8NBA8 298 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 OR8B3Q8NGG8 313 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 ERGIC1Q969X5 290 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 DERL3Q96Q80 235 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 OR2A5Q96R48 311 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 CST9LQ9H4G1 147 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 SLC17A5Q9NRA2 495 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 SLC25A6P12236 298 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 CCL2P13500 99 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 FUT3P21217 361 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 P2RY1P47900 373 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 RTL8BQ17RB0 113 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 OR4S2Q8NH73 311 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 NEU3Q9UQ49 428 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 ASPDHA6ND91 283 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 FXYD1O00168 92 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 LSM11P83369 360 aaKnown RBP eCLIP9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 ZNF816Q0VGE8 651 aaPredicted RBP9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 REG4Q9BYZ8 158 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 C20orf141Q9NUB4 165 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 LRP12Q9Y561 859 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 AGAP20933 346 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 IER3P46695 156 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 CYB561D1Q8N8Q1 229 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 OR10AG1Q8NH19 301 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 GPBAR1Q8TDU6 330 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 CHST6Q9GZX3 395 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 MAGT1Q9H0U3 335 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 PPP1R3EQ9H7J1 279 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 ADRA2AP08913 450 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 SUB1P53999 127 aaKnown RBP eCLIP9.78□□□□□ -0.848e-6■■■□□ 15.3
SMARCE1-202ENST00000348513 NKG7Q16617 165 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 SYS1Q8N2H4 156 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 OR10V1Q8NGI7 309 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 DIRC2Q96SL1 478 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 PSENENQ9NZ42 101 aa9.78□□□□□ -0.84
SMARCE1-202ENST00000348513 FAM24AA6NFZ4 105 aa9.77□□□□□ -0.84
SMARCE1-202ENST00000348513 COLCA2A8K830 154 aa9.77□□□□□ -0.84
SMARCE1-202ENST00000348513 ALG1L2C9J202 215 aa9.77□□□□□ -0.84
SMARCE1-202ENST00000348513 CDC14BO60729 498 aa9.77□□□□□ -0.84
SMARCE1-202ENST00000348513 NXPH1P58417 271 aa9.77□□□□□ -0.84
SMARCE1-202ENST00000348513 FAM60AQ9NP50 221 aa9.77□□□□□ -0.84
SMARCE1-202ENST00000348513 OCIAD1Q9NX40 245 aa9.77□□□□□ -0.84
SMARCE1-202ENST00000348513 ONECUT1Q9UBC0 465 aa9.77□□□□□ -0.84
SMARCE1-202ENST00000348513 A0A1B0GWB2 263 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 A8MWP6 167 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 PRSS23O95084 383 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 SPINK14Q6IE38 97 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 ZNF683Q8IZ20 524 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 STXBP6Q8NFX7 210 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 ZG16BQ96DA0 208 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 ADTRPQ96IZ2 230 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 SEBOXQ9HB31 216 aaPredicted RBP9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 HOXA6P31267 233 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 KIR3DL2P43630 455 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 FGF8P55075 233 aaPredicted RBP9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 PRSS12P56730 875 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 IL11RAQ14626 422 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 HIKESHIQ53FT3 197 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 OSR2Q8N2R0 312 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 D2HGDHQ8N465 521 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 YAE1D1Q9NRH1 226 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 ZNF391Q9UJN7 358 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 A0A087WWC5 75 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 CTXN2P0C2S0 81 aa9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 FNDC4Q9H6D8 234 aaPredicted RBP9.77□□□□□ -0.85
SMARCE1-202ENST00000348513 TRAV17A0A0B4J275 112 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 MMP9P14780 707 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 DCAF12L2Q5VW00 463 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 AMMECR1LQ6DCA0 310 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 C20orf196Q8IYI0 205 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 SSBP4Q9BWG4 385 aaPredicted RBP9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 ADAMTSL1Q8N6G6 1762 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 C19orf67A6NJJ6 358 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 TNFSF13O75888 250 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 LYZL6O75951 148 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 CT62P0C5K7 136 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 GAB4Q2WGN9 574 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 ST6GALNAC3Q8NDV1 305 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 GPR32P1Q8NGA4 272 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 OR1F12Q8NHA8 337 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 S1PR3Q99500 378 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms