RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 MRPL37Q9BZE1 423 aaKnown RBP13.67□□□□□ -0.22
HMGA1-202ENST00000347617 P4HTMQ9NXG6 502 aa13.67□□□□□ -0.22
HMGA1-202ENST00000347617 MED19A0JLT2 244 aaPredicted RBP13.66□□□□□ -0.22
HMGA1-202ENST00000347617 PROB1E7EW31 1015 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 SERPINA7P05543 415 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 PGA5P0DJD9 388 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 GZMBP10144 247 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 SLC25A6P12236 298 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 UCP1P25874 307 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 OPRM1P35372 400 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 MFAP5Q13361 173 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 SLC10A1Q14973 349 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 USF2Q15853 346 aaPredicted RBP13.66□□□□□ -0.22
HMGA1-202ENST00000347617 HES3Q5TGS1 186 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 TSPO2Q5TGU0 170 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 ABLIM2Q6H8Q1 611 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 MEX3BQ6ZN04 569 aaKnown RBP13.66□□□□□ -0.22
HMGA1-202ENST00000347617 SELENOHQ8IZQ5 122 aaKnown RBP13.66□□□□□ -0.22
HMGA1-202ENST00000347617 OR2V1Q8NHB1 315 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 CYYR1Q96J86 154 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 TP53RKQ96S44 253 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 ZNF391Q9UJN7 358 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 AQP7P3A6NL99 342 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 PPP5D1E7EU14 171 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 SSSCA1O60232 199 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 PDCD6O75340 191 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 PPYP01298 95 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 TK1P04183 234 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 VDAC1P21796 283 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 AADACP22760 399 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 PDLIM4P50479 330 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 RAB11AP62491 216 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 MALLQ13021 153 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 DHRS13Q6UX07 377 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 TECTBQ96PL2 329 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 CALHM2Q9HA72 323 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 CRLF2Q9HC73 371 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 GLRX2Q9NS18 164 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 LRFN1Q9P244 771 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 NAT8Q9UHE5 227 aa13.66□□□□□ -0.22
HMGA1-202ENST00000347617 M0R135 149 aa13.65□□□□□ -0.22
HMGA1-202ENST00000347617 AMBPP02760 352 aa13.65□□□□□ -0.22
HMGA1-202ENST00000347617 FUT3P21217 361 aa13.65□□□□□ -0.22
HMGA1-202ENST00000347617 CD82P27701 267 aa13.65□□□□□ -0.22
HMGA1-202ENST00000347617 NPBWR2P48146 333 aa13.65□□□□□ -0.22
HMGA1-202ENST00000347617 RRADP55042 308 aa13.65□□□□□ -0.22
HMGA1-202ENST00000347617 RELQ04864 619 aaPredicted RBP13.65□□□□□ -0.22
HMGA1-202ENST00000347617 MRGPRGQ86SM5 289 aa13.65□□□□□ -0.22
HMGA1-202ENST00000347617 OSR2Q8N2R0 312 aa13.65□□□□□ -0.22
HMGA1-202ENST00000347617 OR4X1Q8NH49 305 aa13.65□□□□□ -0.22
HMGA1-202ENST00000347617 ZNF799Q96GE5 643 aa13.65□□□□□ -0.22
HMGA1-202ENST00000347617 BTF3L4Q96K17 158 aa13.65□□□□□ -0.22
HMGA1-202ENST00000347617 SNX22Q96L94 193 aa13.65□□□□□ -0.22
HMGA1-202ENST00000347617 PARD6AQ9NPB6 346 aa13.65□□□□□ -0.22
HMGA1-202ENST00000347617 FOXJ2Q9P0K8 574 aa13.65□□□□□ -0.22
HMGA1-202ENST00000347617 CACNA1HO95180 2353 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 C2orf72A6NCS6 295 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 FAM90A10PA6NDY2 464 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 FAM90A18PA6NE21 464 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 FAM90A16PA6NEW6 464 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 FAM90A20PA6NIJ5 464 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 FAM90A8PA6NJQ4 464 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 PCNX2A6NKB5 2137 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 FAM90A7PA6NKC0 464 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 FAM90A22PA8MWA6 464 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 FAM90A12PA8MX19 464 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 FAM90A5PA8MXJ8 464 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 FAM90A23PA8MXZ1 464 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 E9PLN8 166 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 EFNA2O43921 213 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 CELA2AP08217 269 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 FAM90A15PP0C7V4 464 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 FAM90A13PP0C7W8 464 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 FAM90A14PP0C7W9 464 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 FAM90A24PP0C7X0 464 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 OTX2P32243 289 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 NMSQ5H8A3 153 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 CARD17Q5XLA6 110 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 ZNF787Q6DD87 383 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 UNQ6494/PRO21346Q6UXR6 183 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 TGIF2LXQ8IUE1 241 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 OR11L1Q8NGX0 322 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 POC1BQ8TC44 478 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 TMEM54Q969K7 222 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 TMEM18Q96B42 140 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 RAB40CQ96S21 281 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 PARD6GQ9BYG4 376 aaPredicted RBP13.64□□□□□ -0.23
HMGA1-202ENST00000347617 GNG13Q9P2W3 67 aa13.64□□□□□ -0.23
HMGA1-202ENST00000347617 F5H5K5 113 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 CRYABP02511 175 aaKnown RBP13.63□□□□□ -0.23
HMGA1-202ENST00000347617 FAM3BP58499 235 aaPredicted RBP13.63□□□□□ -0.23
HMGA1-202ENST00000347617 SERF2P84101 59 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 ENDOGQ14249 297 aaKnown RBP13.63□□□□□ -0.23
HMGA1-202ENST00000347617 RNPS1Q15287 305 aaKnown RBP13.63□□□□□ -0.23
HMGA1-202ENST00000347617 IQCJQ1A5X6 159 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 ACOT6Q3I5F7 207 aaPredicted RBP13.63□□□□□ -0.23
HMGA1-202ENST00000347617 CENPVQ7Z7K6 275 aaPredicted RBP13.63□□□□□ -0.23
HMGA1-202ENST00000347617 ZNF664Q8N3J9 261 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 OR5D13Q8NGL4 314 aa13.63□□□□□ -0.23
HMGA1-202ENST00000347617 CA5BP1Q8WTZ4 195 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms