RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 FOXB1Q99853 325 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 ZBP1Q9H171 429 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 KCNE3Q9Y6H6 103 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 LSM6P62312 80 aaKnown RBP17.14■□□□□ 0.33
HDAC4-201ENST00000345617 CEACAM16Q2WEN9 425 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 SLC25A34Q6PIV7 304 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 CLEC18BQ6UXF7 455 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 NTMQ9P121 344 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 SBF1O95248 1867 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 HSPB1P04792 205 aaKnown RBP17.14■□□□□ 0.33
HDAC4-201ENST00000345617 ORM2P19652 201 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 RPS20P60866 119 aaKnown RBP17.14■□□□□ 0.33
HDAC4-201ENST00000345617 PRSS23O95084 383 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 PCBP3P57721 371 aaKnown RBP17.14■□□□□ 0.33
HDAC4-201ENST00000345617 LDLRAD1Q5T700 205 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 C10orf126Q8N4M7 172 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 OR6X1Q8NH79 312 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 RAB33BQ9H082 229 aa17.14■□□□□ 0.33
HDAC4-201ENST00000345617 CSN3P07498 182 aa17.13■□□□□ 0.33
HDAC4-201ENST00000345617 ZNF77Q15935 545 aa17.13■□□□□ 0.33
HDAC4-201ENST00000345617 TNFSF18Q9UNG2 199 aa17.13■□□□□ 0.33
HDAC4-201ENST00000345617 K7EQS6 105 aa17.13■□□□□ 0.33
HDAC4-201ENST00000345617 FAM157CP0CG43 387 aa17.13■□□□□ 0.33
HDAC4-201ENST00000345617 MRPL30Q8TCC3 161 aaKnown RBP17.13■□□□□ 0.33
HDAC4-201ENST00000345617 ALG1L2C9J202 215 aa17.13■□□□□ 0.33
HDAC4-201ENST00000345617 IL11RAQ14626 422 aa17.13■□□□□ 0.33
HDAC4-201ENST00000345617 LILRA3Q8N6C8 439 aaPredicted RBP17.13■□□□□ 0.33
HDAC4-201ENST00000345617 GPR27Q9NS67 375 aa17.13■□□□□ 0.33
HDAC4-201ENST00000345617 OR13H1Q8NG92 308 aa17.13■□□□□ 0.33
HDAC4-201ENST00000345617 CYB561D1Q8N8Q1 229 aa17.13■□□□□ 0.33
HDAC4-201ENST00000345617 WDR13Q9H1Z4 485 aa17.13■□□□□ 0.33
HDAC4-201ENST00000345617 NKX2-2O95096 273 aa17.13■□□□□ 0.33
HDAC4-201ENST00000345617 TEX30Q5JUR7 227 aa17.13■□□□□ 0.33
HDAC4-201ENST00000345617 DNLZQ5SXM8 178 aa17.13■□□□□ 0.33
HDAC4-201ENST00000345617 ETFBKMTQ8IXQ9 262 aa17.12■□□□□ 0.33
HDAC4-201ENST00000345617 OR1P1Q8NH06 330 aa17.12■□□□□ 0.33
HDAC4-201ENST00000345617 CNRIP1Q96F85 164 aaPredicted RBP17.12■□□□□ 0.33
HDAC4-201ENST00000345617 MRGPRX1Q96LB2 322 aa17.12■□□□□ 0.33
HDAC4-201ENST00000345617 TYMSP04818 313 aa17.12■□□□□ 0.33
HDAC4-201ENST00000345617 HIST1H4GQ99525 98 aa17.12■□□□□ 0.33
HDAC4-201ENST00000345617 PPYP01298 95 aa17.12■□□□□ 0.33
HDAC4-201ENST00000345617 C19orf24Q9BVV8 132 aa17.12■□□□□ 0.33
HDAC4-201ENST00000345617 RAC3P60763 192 aa17.12■□□□□ 0.33
HDAC4-201ENST00000345617 ZNF788Q6ZQV5 615 aa17.12■□□□□ 0.33
HDAC4-201ENST00000345617 RFLNAQ6ZTI6 216 aa17.12■□□□□ 0.33
HDAC4-201ENST00000345617 SFTPA2Q8IWL1 248 aa17.12■□□□□ 0.33
HDAC4-201ENST00000345617 SFTPA1Q8IWL2 248 aa17.12■□□□□ 0.33
HDAC4-201ENST00000345617 SYT8Q8NBV8 401 aa17.12■□□□□ 0.33
HDAC4-201ENST00000345617 OR10AG1Q8NH19 301 aa17.12■□□□□ 0.33
HDAC4-201ENST00000345617 FAM169BQ8N8A8 192 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 OR11H7Q8NGC8 314 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 NUBPLQ8TB37 319 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 KLF3P57682 345 aaPredicted RBP17.11■□□□□ 0.33
HDAC4-201ENST00000345617 FOXF1Q12946 379 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 DMKNQ6E0U4 476 aaPredicted RBP17.11■□□□□ 0.33
HDAC4-201ENST00000345617 CA5BP1Q8WTZ4 195 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 FGF22Q9HCT0 170 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 WIPI2Q9Y4P8 454 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 ASB1Q9Y576 335 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 ID1P41134 155 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 DUSP2Q05923 314 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 WFDC8Q8IUA0 241 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 LOC107984156A0A0G2JMH3 177 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 ARL17AQ8IVW1 177 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 PQLC2LA1A4F0 135 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 TSPAN13O95857 204 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 AMY1AP04745 511 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 SELENOTP62341 195 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 TSPAN32Q96QS1 320 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 C7orf66A4D0T2 115 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 FBLL1A6NHQ2 334 aaKnown RBP17.11■□□□□ 0.33
HDAC4-201ENST00000345617 CHST1O43916 411 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 ZNF385CQ66K41 422 aaPredicted RBP17.11■□□□□ 0.33
HDAC4-201ENST00000345617 TGIF2LYQ8IUE0 185 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 SFRP2Q96HF1 295 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 CLN8Q9UBY8 286 aa17.11■□□□□ 0.33
HDAC4-201ENST00000345617 TNFSF10P50591 281 aa17.1■□□□□ 0.33
HDAC4-201ENST00000345617 PPIL1Q9Y3C6 166 aa17.1■□□□□ 0.33
HDAC4-201ENST00000345617 WDR31Q8NA23 367 aa17.1■□□□□ 0.33
HDAC4-201ENST00000345617 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.1■□□□□ 0.33
HDAC4-201ENST00000345617 GNG7O60262 68 aa17.1■□□□□ 0.33
HDAC4-201ENST00000345617 HLA-DRB1P01911 266 aa17.1■□□□□ 0.33
HDAC4-201ENST00000345617 CDAP32320 146 aa17.1■□□□□ 0.33
HDAC4-201ENST00000345617 OR4P4Q8NGL7 312 aa17.1■□□□□ 0.33
HDAC4-201ENST00000345617 NPIPB6E9PJ23 425 aa17.1■□□□□ 0.33
HDAC4-201ENST00000345617 OGG1O15527 345 aa17.1■□□□□ 0.33
HDAC4-201ENST00000345617 ZDHHC16Q969W1 377 aa17.1■□□□□ 0.33
HDAC4-201ENST00000345617 FREM1Q5H8C1 2179 aa17.1■□□□□ 0.33
HDAC4-201ENST00000345617 CTSVO60911 334 aa17.1■□□□□ 0.33
HDAC4-201ENST00000345617 FAM131CQ96AQ9 280 aa17.1■□□□□ 0.33
HDAC4-201ENST00000345617 H3BMH7 237 aa17.09■□□□□ 0.33
HDAC4-201ENST00000345617 CD1AP06126 327 aa17.09■□□□□ 0.33
HDAC4-201ENST00000345617 CALHM1Q8IU99 346 aa17.09■□□□□ 0.33
HDAC4-201ENST00000345617 RBFOX2O43251 390 aaKnown RBP eCLIP17.09■□□□□ 0.338e-8■■■■■ 345.6
HDAC4-201ENST00000345617 POLR2GP62487 172 aaKnown RBP eCLIP17.09■□□□□ 0.33
HDAC4-201ENST00000345617 NEUROG1Q92886 237 aa17.09■□□□□ 0.33
HDAC4-201ENST00000345617 MRPL54Q6P161 138 aaKnown RBP17.09■□□□□ 0.33
HDAC4-201ENST00000345617 PLPP3O14495 311 aa17.09■□□□□ 0.33
HDAC4-201ENST00000345617 DTD1Q8TEA8 209 aa17.09■□□□□ 0.33
HDAC4-201ENST00000345617 CHST5Q9GZS9 411 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms