RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ZFHX3Q15911 3703 aa9.71□□□□□ -0.86
SNCA-202ENST00000345009 A0A0A6YYH2 397 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 A0A0B4J203 849 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 IGHV1-69DA0A0B4J2H0 117 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 CENPVL3A0A0U1RRI6 287 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 CCDC160A6NGH7 325 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 A6NJ64 397 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 SERPINE3A8MV23 424 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 SOCS1O15524 211 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 SPINT2O43291 252 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 ORC5O43913 435 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 CLPXO76031 633 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 PAHP00439 452 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 IGHV1-69P01742 117 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 IGHV1-8P0DP01 117 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 HOXB4P17483 251 aaPredicted RBP9.7□□□□□ -0.86
SNCA-202ENST00000345009 TGFBR1P36897 503 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 DYNC1I2Q13409 638 aaKnown RBP9.7□□□□□ -0.86
SNCA-202ENST00000345009 TMEM30BQ3MIR4 351 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 MZT2AQ6P582 158 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 C6orf201Q7Z4U5 140 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 PLPPR1Q8TBJ4 325 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 LGALS14Q8TCE9 139 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 MRGPRDQ8TDS7 321 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 ZNF418Q8TF45 676 aaPredicted RBP9.7□□□□□ -0.86
SNCA-202ENST00000345009 CCDC107Q8WV48 283 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 S100A16Q96FQ6 103 aaKnown RBP9.7□□□□□ -0.86
SNCA-202ENST00000345009 ARHGAP5-AS1Q96IT6 56 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 SULT4A1Q9BR01 284 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 SUCNR1Q9BXA5 334 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 NAA50Q9GZZ1 169 aaKnown RBP9.7□□□□□ -0.86
SNCA-202ENST00000345009 RHBDL2Q9NX52 303 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 ZNF581Q9P0T4 197 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 FAM96BQ9Y3D0 163 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 SESN1Q9Y6P5 492 aa9.7□□□□□ -0.86
SNCA-202ENST00000345009 SMIM31A0A1B0GVY4 71 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 MEX3AA1L020 520 aaKnown RBP9.69□□□□□ -0.86
SNCA-202ENST00000345009 FSHBP01225 129 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 CD3GP09693 182 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 IGHV4-38-2P0DP08 117 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 ZNF182P17025 639 aaPredicted RBP9.69□□□□□ -0.86
SNCA-202ENST00000345009 CDK2P24941 298 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 TALDO1P37837 337 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 EFNB2P52799 333 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 PRRX1P54821 245 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 DLX6P56179 175 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 MIDNQ504T8 468 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 KLF17Q5JT82 389 aaPredicted RBP9.69□□□□□ -0.86
SNCA-202ENST00000345009 MOB1BQ7L9L4 216 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 RTN4RL2Q86UN3 420 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 GAPTQ8N292 157 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 OR4K15Q8NH41 348 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 ARL11Q969Q4 196 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 CREB3L1Q96BA8 519 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 CMTM3Q96MX0 182 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 JMJD8Q96S16 334 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 CMSS1Q9BQ75 279 aaKnown RBP9.69□□□□□ -0.86
SNCA-202ENST00000345009 PECRQ9BY49 303 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 LINC00574Q9H8X3 128 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 C12orf4Q9NQ89 552 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 CALYQ9NYX4 217 aa9.69□□□□□ -0.86
SNCA-202ENST00000345009 DSCAML1Q8TD84 2053 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 SVEP1Q4LDE5 3571 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 A0A075B6Q4 140 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 IGHV3OR16-10A0A075B7F0 116 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 A0A0A6YYD4 124 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 A0A0A6YYJ9 748 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 RNASEK-C17orf49H0YIS7 233 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 RAB27BO00194 218 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 TOR1AO14656 332 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 NPFFO15130 113 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 NFYBP25208 207 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 TMEM50BP56557 158 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 RIPPLY3P57055 190 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 PITPNAQ00169 270 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 ARFRP1Q13795 201 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 UBE2NLQ5JXB2 153 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 ZNF782Q6ZMW2 699 aaPredicted RBP9.68□□□□□ -0.86
SNCA-202ENST00000345009 C9orf139Q6ZV77 190 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 PDZD9Q8IXQ8 264 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 PNKDQ8N490 385 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 C11orf42Q8N5U0 333 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 SAMD12Q8N8I0 201 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 OR13A1Q8NGR1 328 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 ZNF596Q8TC21 504 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 TNFRSF14Q92956 283 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 TMEM133Q9H2Q1 129 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 IDI2-AS1Q9NZ38 188 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 NDUFA13Q9P0J0 144 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 ZNF69Q9UC07 566 aa9.68□□□□□ -0.86
SNCA-202ENST00000345009 MEIOCA2RUB1 952 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 FOXI3A8MTJ6 420 aaPredicted RBP9.67□□□□□ -0.86
SNCA-202ENST00000345009 NPIPB11E5RHQ5 1161 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 ZNF701M0R085 212 aaPredicted RBP9.67□□□□□ -0.86
SNCA-202ENST00000345009 NAPSAO96009 420 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 GSTP1P09211 210 aaKnown RBP9.67□□□□□ -0.86
SNCA-202ENST00000345009 CGB3P0DN86 165 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 CGB7P0DN87 165 aa9.67□□□□□ -0.86
SNCA-202ENST00000345009 HIST1H1DP16402 221 aaKnown RBP9.67□□□□□ -0.86
SNCA-202ENST00000345009 GNB3P16520 340 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms