RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 GTF2F2P13984 249 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 TMEM11P17152 192 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 GZMHP20718 246 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 CAPGP40121 348 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 ADARB1P78563 741 aaKnown RBP9.89□□□□□ -0.83
SGCA-202ENST00000344627 GPR176Q14439 515 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 Q499Y3 187 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 YIF1BQ5BJH7 314 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 DMKNQ6E0U4 476 aaPredicted RBP9.89□□□□□ -0.83
SGCA-202ENST00000344627 MOB3BQ86TA1 216 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 C8orf59Q8N0T1 100 aaPredicted RBP9.89□□□□□ -0.83
SGCA-202ENST00000344627 DRAM1Q8N682 238 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 PACRGLQ8N7B6 248 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 Q8NFD4 153 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 OR51D1Q8NGF3 324 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 ARL11Q969Q4 196 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 MUL1Q969V5 352 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 DCLRE1BQ9H816 532 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 IL36GQ9NZH8 169 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 MRPS28Q9Y2Q9 187 aaKnown RBP9.89□□□□□ -0.83
SGCA-202ENST00000344627 MOB4Q9Y3A3 225 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 RRP15Q9Y3B9 282 aaKnown RBP9.89□□□□□ -0.83
SGCA-202ENST00000344627 HSPE1-MOB4S4R3N1 261 aa9.89□□□□□ -0.83
SGCA-202ENST00000344627 DNAH3Q8TD57 4116 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 TRAV8-7A0A075B6U6 113 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 TRBV5-5A0A0J9YX44 114 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 NPIPB11E5RHQ5 1161 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 ANKRD65E5RJM6 399 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 SDCBPO00560 298 aaPredicted RBP9.88□□□□□ -0.83
SGCA-202ENST00000344627 MYL12BO14950 172 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 ZNF780AO75290 641 aaPredicted RBP9.88□□□□□ -0.83
SGCA-202ENST00000344627 MAS1P04201 325 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 RAB7AP51149 207 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 TAS2R43P59537 309 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 DIAPH2-AS1Q14236 149 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 MPV17LQ2QL34 196 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 AWAT2Q6E213 333 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 GLIPR1L1Q6UWM5 242 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 LINC00596Q86U02 117 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 THNSL2Q86YJ6 484 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 BPIFB6Q8NFQ5 453 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 OR14A2Q96R54 314 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 BOLA1Q9Y3E2 137 aa9.88□□□□□ -0.83
SGCA-202ENST00000344627 IGHV3-43A0A0B4J1X8 118 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 MAGEA13PA6NCF6 341 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 MCRIP1C9JLW8 97 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 AIPO00170 330 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 CCRL2O00421 344 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 AMY1AP04745 511 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 AMY2AP04746 511 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 GNAO1P09471 354 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 IGHV3-43DP0DP04 118 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 IGFBP3P17936 291 aaPredicted RBP9.87□□□□□ -0.83
SGCA-202ENST00000344627 CELP19835 753 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 REG1BP48304 166 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 GP2P55259 537 aaKnown RBP9.87□□□□□ -0.83
SGCA-202ENST00000344627 NHLRC3Q5JS37 347 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 SLC16A12Q6ZSM3 486 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 AHSA2Q719I0 299 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 OR8H3Q8N146 312 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 PRR18Q8N4B5 295 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 COMMD1Q8N668 190 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 OR10A7Q8NGE5 316 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 MYDGFQ969H8 173 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 BANF2Q9H503 90 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 IFT22Q9H7X7 185 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 LINC00574Q9H8X3 128 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 ZFP57Q9NU63 452 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 TRAPPC2LQ9UL33 140 aa9.87□□□□□ -0.83
SGCA-202ENST00000344627 IGHV3-72A0A0B4J1Y9 119 aa9.86□□□□□ -0.83
SGCA-202ENST00000344627 PSMB11A5LHX3 300 aa9.86□□□□□ -0.83
SGCA-202ENST00000344627 NCBP2LA6PVI3 153 aaKnown RBP9.86□□□□□ -0.83
SGCA-202ENST00000344627 CRTAPO75718 401 aaPredicted RBP9.86□□□□□ -0.83
SGCA-202ENST00000344627 IGKV1D-33P01593 117 aa9.86□□□□□ -0.83
SGCA-202ENST00000344627 IGKV1-33P01594 117 aa9.86□□□□□ -0.83
SGCA-202ENST00000344627 GAPDHP04406 335 aaKnown RBP9.86□□□□□ -0.83
SGCA-202ENST00000344627 IGLL1P15814 213 aa9.86□□□□□ -0.83
SGCA-202ENST00000344627 RPS11P62280 158 aaKnown RBP eCLIP9.86□□□□□ -0.83
SGCA-202ENST00000344627 PAX5Q02548 391 aa9.86□□□□□ -0.83
SGCA-202ENST00000344627 EGFEM1PQ0D2K5 195 aa9.86□□□□□ -0.83
SGCA-202ENST00000344627 C10orf99Q6UWK7 81 aa9.86□□□□□ -0.83
SGCA-202ENST00000344627 ZNF329Q86UD4 541 aa9.86□□□□□ -0.83
SGCA-202ENST00000344627 PGLYRP3Q96LB9 341 aa9.86□□□□□ -0.83
SGCA-202ENST00000344627 SELENOIQ9C0D9 397 aa9.86□□□□□ -0.83
SGCA-202ENST00000344627 VCXQ9H320 206 aa9.86□□□□□ -0.83
SGCA-202ENST00000344627 SPACA1Q9HBV2 294 aa9.86□□□□□ -0.83
SGCA-202ENST00000344627 ETAA1Q9NY74 926 aa9.86□□□□□ -0.83
SGCA-202ENST00000344627 CNOT2Q9NZN8 540 aaKnown RBP9.86□□□□□ -0.83
SGCA-202ENST00000344627 PSORS1C1Q9UIG5 152 aa9.86□□□□□ -0.83
SGCA-202ENST00000344627 ERGIC3Q9Y282 383 aa9.86□□□□□ -0.83
SGCA-202ENST00000344627 PEX16Q9Y5Y5 336 aa9.86□□□□□ -0.83
SGCA-202ENST00000344627 TRBV5-7A0A0A0MS05 114 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 A0A1W2PPI3 338 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 FAM90A18PA6NE21 464 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 FAM90A16PA6NEW6 464 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 FAM90A20PA6NIJ5 464 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 FAM90A9PA6NNJ1 464 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 SERPINE3A8MV23 424 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 FAM90A12PA8MX19 464 aa9.85□□□□□ -0.83
SGCA-202ENST00000344627 FAM90A5PA8MXJ8 464 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms