RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 FAM90A12PA8MX19 464 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 FAM90A5PA8MXJ8 464 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 FAM90A23PA8MXZ1 464 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 TOX3O15405 576 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-203ENST00000343508 FAM90A15PP0C7V4 464 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 FAM90A13PP0C7W8 464 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 FAM90A14PP0C7W9 464 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 FAM90A24PP0C7X0 464 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 AGAP20933 346 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 OR5AS1Q8N127 324 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 GALNT14Q96FL9 552 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 NRTNQ99748 197 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 RSG1Q9BU20 258 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 SLC7A10Q9NS82 523 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 NKX2-6A6NCS4 301 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 HAND1O96004 215 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 HIST1H1BP16401 226 aaKnown RBP4.18□□□□□ -1.74
CSMD3-203ENST00000343508 ZNF124Q15973 351 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 CA5BP1Q8WTZ4 195 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 SRD5A3Q9H8P0 318 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 COA4Q9NYJ1 87 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 ATP23Q9Y6H3 246 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 SNURFLB1AK76 121 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 NGFP01138 241 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 LCN2P80188 198 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 INSM1Q01101 510 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-203ENST00000343508 CEACAM16Q2WEN9 425 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 PRR27Q6MZM9 219 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 NHLRC2Q8NBF2 726 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 OR10AD1Q8NGE0 317 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 HSD17B10Q99714 261 aaKnown RBP4.18□□□□□ -1.74
CSMD3-203ENST00000343508 MPC1Q9Y5U8 109 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 ATG2BQ96BY7 2078 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 K7ERU9 68 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 NRG2O14511 850 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-203ENST00000343508 EGR4Q05215 589 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 GAMTQ14353 236 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 SGMS2Q8NHU3 365 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 ZNRF4Q8WWF5 429 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 MARS2Q96GW9 593 aaKnown RBP4.18□□□□□ -1.74
CSMD3-203ENST00000343508 GPR27Q9NS67 375 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 C1QL1O75973 258 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 MYPOPQ86VE0 399 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-203ENST00000343508 TMEM252Q8N6L7 170 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 CNEP1R1Q8N9A8 125 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 TMEM178AQ8NBL3 297 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 RBKSQ9H477 322 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 NPVFQ9HCQ7 196 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 WBP1LQ9NX94 342 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 COLCA2A8K830 154 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 GALR2O43603 387 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-203ENST00000343508 OR5G3P0C626 314 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 RBM11P57052 281 aaKnown RBP4.18□□□□□ -1.74
CSMD3-203ENST00000343508 ZNF774Q6NX45 483 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 ANKRD37Q7Z713 158 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 MOB3AQ96BX8 217 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 ALKBH3Q96Q83 286 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-203ENST00000343508 AMELYQ99218 206 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 SIAH2O43255 324 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 ADH4P08319 380 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 TGIF1Q15583 401 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 HLA-DRB5Q30154 266 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 DTD1Q8TEA8 209 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 MUCL1Q96DR8 90 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 A0A1B0GV90 55 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 DBX1A6NMT0 343 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 C4orf51C9J302 202 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 PAGE4O60829 102 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 PSG2P11465 335 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 DEFA4P12838 97 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 EDN3P14138 238 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 H0YL77 283 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 CT45A10P0DMU9 189 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 CD1BP29016 333 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 PCP4P48539 62 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 RNPS1Q15287 305 aaKnown RBP4.18□□□□□ -1.74
CSMD3-203ENST00000343508 SPATA45Q537H7 98 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 LSM10Q969L4 123 aaKnown RBP4.18□□□□□ -1.74
CSMD3-203ENST00000343508 C8orf44Q96CB5 159 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 STARD4Q96DR4 205 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 LRFN3Q9BTN0 628 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 ELOVL1Q9BW60 279 aa4.18□□□□□ -1.74
CSMD3-203ENST00000343508 TSPAN2O60636 221 aa4.17□□□□□ -1.74
CSMD3-203ENST00000343508 VENTXO95231 258 aa4.17□□□□□ -1.74
CSMD3-203ENST00000343508 EML2O95834 649 aa4.17□□□□□ -1.74
CSMD3-203ENST00000343508 MYOGP15173 224 aa4.17□□□□□ -1.74
CSMD3-203ENST00000343508 IGFBP3P17936 291 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-203ENST00000343508 IL3RAP26951 378 aa4.17□□□□□ -1.74
CSMD3-203ENST00000343508 C9orf40Q8IXQ3 194 aa4.17□□□□□ -1.74
CSMD3-203ENST00000343508 OR1L4Q8NGR5 311 aa4.17□□□□□ -1.74
CSMD3-203ENST00000343508 MENTQ9BUN1 341 aa4.17□□□□□ -1.74
CSMD3-203ENST00000343508 COMMD5Q9GZQ3 224 aa4.17□□□□□ -1.74
CSMD3-203ENST00000343508 FAM90A26D6RGX4 464 aa4.17□□□□□ -1.74
CSMD3-203ENST00000343508 F2RP25116 425 aa4.17□□□□□ -1.74
CSMD3-203ENST00000343508 CXCL12P48061 93 aa4.17□□□□□ -1.74
CSMD3-203ENST00000343508 RAB7AP51149 207 aa4.17□□□□□ -1.74
CSMD3-203ENST00000343508 EDDM3AQ14507 147 aa4.17□□□□□ -1.74
CSMD3-203ENST00000343508 ZNF645Q8N7E2 425 aa4.17□□□□□ -1.74
CSMD3-203ENST00000343508 RNF2Q99496 336 aa4.17□□□□□ -1.74
CSMD3-203ENST00000343508 TPPP3Q9BW30 176 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms