RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 TRBV23-1A0A0A0MS06 115 aa17.11■□□□□ 0.33
SNX21-201ENST00000342644 ODAMA1E959 279 aa17.11■□□□□ 0.33
SNX21-201ENST00000342644 A8MXK9 166 aa17.11■□□□□ 0.33
SNX21-201ENST00000342644 DHFRP00374 187 aa17.11■□□□□ 0.33
SNX21-201ENST00000342644 FCGR3AP08637 254 aa17.11■□□□□ 0.33
SNX21-201ENST00000342644 GLIPR1P48060 266 aa17.11■□□□□ 0.33
SNX21-201ENST00000342644 MEF2CQ06413 473 aaPredicted RBP17.11■□□□□ 0.33
SNX21-201ENST00000342644 ESCO2Q56NI9 601 aa17.11■□□□□ 0.33
SNX21-201ENST00000342644 Q6ZS49 121 aa17.11■□□□□ 0.33
SNX21-201ENST00000342644 ZNF554Q86TJ5 538 aa17.11■□□□□ 0.33
SNX21-201ENST00000342644 SSBP3Q9BWW4 388 aaPredicted RBP17.11■□□□□ 0.33
SNX21-201ENST00000342644 LPAR3Q9UBY5 353 aa17.11■□□□□ 0.33
SNX21-201ENST00000342644 KIF25Q9UIL4 384 aa17.11■□□□□ 0.33
SNX21-201ENST00000342644 MGAT4AQ9UM21 535 aa17.11■□□□□ 0.33
SNX21-201ENST00000342644 VPS13CQ709C8 3753 aa17.1■□□□□ 0.33
SNX21-201ENST00000342644 CSMD1Q96PZ7 3565 aa17.1■□□□□ 0.33
SNX21-201ENST00000342644 INMT-MINDY4F8WBC2 141 aa17.1■□□□□ 0.33
SNX21-201ENST00000342644 TCRBP04435 133 aa17.1■□□□□ 0.33
SNX21-201ENST00000342644 HEXAP06865 529 aa17.1■□□□□ 0.33
SNX21-201ENST00000342644 USF1P22415 310 aaPredicted RBP17.1■□□□□ 0.33
SNX21-201ENST00000342644 EDDM3BP56851 147 aa17.1■□□□□ 0.33
SNX21-201ENST00000342644 GNB2P62879 340 aa17.1■□□□□ 0.33
SNX21-201ENST00000342644 EDDM3AQ14507 147 aa17.1■□□□□ 0.33
SNX21-201ENST00000342644 MOB1BQ7L9L4 216 aa17.1■□□□□ 0.33
SNX21-201ENST00000342644 FGFRL1Q8N441 504 aa17.1■□□□□ 0.33
SNX21-201ENST00000342644 CORO2AQ92828 525 aa17.1■□□□□ 0.33
SNX21-201ENST00000342644 NUDT15Q9NV35 164 aa17.1■□□□□ 0.33
SNX21-201ENST00000342644 OR6C3Q9NZP0 311 aa17.1■□□□□ 0.33
SNX21-201ENST00000342644 MEIKINA0A087WXM9 373 aa17.09■□□□□ 0.33
SNX21-201ENST00000342644 ZNF736B4DX44 427 aaPredicted RBP17.09■□□□□ 0.33
SNX21-201ENST00000342644 TBPP20226 339 aa17.09■□□□□ 0.33
SNX21-201ENST00000342644 SEC61A1P61619 476 aaKnown RBP17.09■□□□□ 0.33
SNX21-201ENST00000342644 LOXL1Q08397 574 aaPredicted RBP17.09■□□□□ 0.33
SNX21-201ENST00000342644 MEF2DQ14814 521 aa17.09■□□□□ 0.33
SNX21-201ENST00000342644 STEAP1BQ6NZ63 245 aa17.09■□□□□ 0.33
SNX21-201ENST00000342644 ZNF782Q6ZMW2 699 aaPredicted RBP17.09■□□□□ 0.33
SNX21-201ENST00000342644 Q6ZPA2 131 aa17.09■□□□□ 0.33
SNX21-201ENST00000342644 GLCCI1Q86VQ1 547 aa17.09■□□□□ 0.33
SNX21-201ENST00000342644 C8orf46Q8TAG6 207 aa17.09■□□□□ 0.33
SNX21-201ENST00000342644 DMRTB1Q96MA1 342 aa17.09■□□□□ 0.33
SNX21-201ENST00000342644 DCTN5Q9BTE1 182 aa17.09■□□□□ 0.33
SNX21-201ENST00000342644 C20orf85Q9H1P6 137 aa17.09■□□□□ 0.33
SNX21-201ENST00000342644 CHMP1AQ9HD42 196 aaPredicted RBP17.09■□□□□ 0.33
SNX21-201ENST00000342644 Q9N2K0 584 aa17.09■□□□□ 0.33
SNX21-201ENST00000342644 FLNBO75369 2602 aaKnown RBP17.08■□□□□ 0.33
SNX21-201ENST00000342644 NAT1P18440 290 aa17.08■□□□□ 0.32
SNX21-201ENST00000342644 RPL31P62899 125 aaKnown RBP17.08■□□□□ 0.32
SNX21-201ENST00000342644 TATDN3Q17R31 274 aa17.08■□□□□ 0.32
SNX21-201ENST00000342644 ACTBL2Q562R1 376 aa17.08■□□□□ 0.32
SNX21-201ENST00000342644 CD276Q5ZPR3 534 aa17.08■□□□□ 0.32
SNX21-201ENST00000342644 TRAT1Q6PIZ9 186 aa17.08■□□□□ 0.32
SNX21-201ENST00000342644 BTN2A1Q7KYR7 527 aa17.08■□□□□ 0.32
SNX21-201ENST00000342644 HOGA1Q86XE5 327 aa17.08■□□□□ 0.32
SNX21-201ENST00000342644 TPRX1Q8N7U7 411 aa17.08■□□□□ 0.32
SNX21-201ENST00000342644 ZNF565Q8N9K5 539 aa17.08■□□□□ 0.32
SNX21-201ENST00000342644 OR4C16Q8NGL9 310 aa17.08■□□□□ 0.32
SNX21-201ENST00000342644 OR4K15Q8NH41 348 aa17.08■□□□□ 0.32
SNX21-201ENST00000342644 TRAPPC2LQ9UL33 140 aa17.08■□□□□ 0.32
SNX21-201ENST00000342644 POLR3KQ9Y2Y1 108 aaPredicted RBP17.08■□□□□ 0.32
SNX21-201ENST00000342644 CCDC168Q8NDH2 2452 aa17.07■□□□□ 0.32
SNX21-201ENST00000342644 hADV38S2A0JD32 116 aa17.07■□□□□ 0.32
SNX21-201ENST00000342644 RAB3DO95716 219 aa17.07■□□□□ 0.32
SNX21-201ENST00000342644 GZMHP20718 246 aa17.07■□□□□ 0.32
SNX21-201ENST00000342644 CCR6P51684 374 aa17.07■□□□□ 0.32
SNX21-201ENST00000342644 RAG2P55895 527 aa17.07■□□□□ 0.32
SNX21-201ENST00000342644 RBMS2Q15434 407 aaKnown RBP17.07■□□□□ 0.32
SNX21-201ENST00000342644 OR56B4Q8NH76 319 aa17.07■□□□□ 0.32
SNX21-201ENST00000342644 CHAC2Q8WUX2 184 aa17.07■□□□□ 0.32
SNX21-201ENST00000342644 C1orf159Q96HA4 380 aa17.07■□□□□ 0.32
SNX21-201ENST00000342644 Q96MF0 132 aa17.07■□□□□ 0.32
SNX21-201ENST00000342644 ING3Q9NXR8 418 aa17.07■□□□□ 0.32
SNX21-201ENST00000342644 OPN4Q9UHM6 478 aa17.07■□□□□ 0.32
SNX21-201ENST00000342644 LINC00312Q9Y6C7 94 aa17.07■□□□□ 0.32
SNX21-201ENST00000342644 TRAV6A0A075B6T7 132 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 KIAA1324LA8MWY0 1029 aaPredicted RBP17.06■□□□□ 0.32
SNX21-201ENST00000342644 FOXH1O75593 365 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 CD3DP04234 171 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 HNRNPCP07910 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
SNX21-201ENST00000342644 CGB3P0DN86 165 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 CGB7P0DN87 165 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 C6orf183Q5T699 404 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 AKAP14Q86UN6 197 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 GVQW1Q8N7I0 195 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 LY6G5BQ8NDX9 201 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 REG4Q9BYZ8 158 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 C19orf12Q9NSK7 152 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 ZNF230Q9UIE0 474 aaPredicted RBP17.06■□□□□ 0.32
SNX21-201ENST00000342644 RPUSD1Q9UJJ7 312 aaKnown RBP17.06■□□□□ 0.32
SNX21-201ENST00000342644 UBE2J1Q9Y385 318 aaPredicted RBP17.06■□□□□ 0.32
SNX21-201ENST00000342644 KIAA2026Q5HYC2 2103 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 TRGV10A0A0A0MS01 117 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 KIR2DS1A0A191URI9 304 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 DISC1C4P0D8 188 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 PHF1O43189 567 aaPredicted RBP17.06■□□□□ 0.32
SNX21-201ENST00000342644 H2AFB2P0C5Z0 115 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 TRAPPC2P0DI81 140 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 TRAPPC2BP0DI82 140 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 RCC1P18754 421 aaPredicted RBP17.06■□□□□ 0.32
SNX21-201ENST00000342644 KIR2DS4P43632 304 aa17.06■□□□□ 0.32
SNX21-201ENST00000342644 KIR2DS1Q14954 304 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms