RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 BOLLQ8N9W6 283 aaKnown RBP16.8■□□□□ 0.28
RTN1-202ENST00000342503 PRORYQ9H606 182 aa16.8■□□□□ 0.28
RTN1-202ENST00000342503 CCL28Q9NRJ3 127 aa16.8■□□□□ 0.28
RTN1-202ENST00000342503 OR1A1Q9P1Q5 309 aa16.8■□□□□ 0.28
RTN1-202ENST00000342503 MBD2Q9UBB5 411 aa16.8■□□□□ 0.28
RTN1-202ENST00000342503 NPIPB11E5RHQ5 1161 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.79■□□□□ 0.28
RTN1-202ENST00000342503 GPR31O00270 319 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 HSD17B6O14756 317 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 MPPED1O15442 326 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 CFDP00746 253 aaPredicted RBP16.79■□□□□ 0.28
RTN1-202ENST00000342503 IGHV1-46P01743 117 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 ASCL1P50553 236 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 RND3P61587 244 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 LIAT1Q6ZQX7 453 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 GCSAMQ8N6F7 178 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 UBALD1Q8TB05 177 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 OR2W1Q9Y3N9 320 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 CCL21O00585 134 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 PHF1O43189 567 aaPredicted RBP16.79■□□□□ 0.28
RTN1-202ENST00000342503 PSG2P11465 335 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 PRDX2P32119 198 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 AESQ08117 197 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 GGNBP1Q5YKI7 109 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 TBC1D26Q86UD7 250 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 LDLRAD3Q86YD5 345 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 COQ2Q96H96 371 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 TAF9BQ9HBM6 251 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 KIF25Q9UIL4 384 aa16.79■□□□□ 0.28
RTN1-202ENST00000342503 C3orf85A0A1B0GTC6 90 aa16.78■□□□□ 0.28
RTN1-202ENST00000342503 IFNA21P01568 189 aa16.78■□□□□ 0.28
RTN1-202ENST00000342503 GATA4P43694 442 aa16.78■□□□□ 0.28
RTN1-202ENST00000342503 TNFAIP6P98066 277 aaPredicted RBP16.78■□□□□ 0.28
RTN1-202ENST00000342503 IL15RAQ13261 267 aa16.78■□□□□ 0.28
RTN1-202ENST00000342503 EXOSC2Q13868 293 aaKnown RBP16.78■□□□□ 0.28
RTN1-202ENST00000342503 FAM90A1Q86YD7 464 aa16.78■□□□□ 0.28
RTN1-202ENST00000342503 LRTM2Q8N967 370 aa16.78■□□□□ 0.28
RTN1-202ENST00000342503 LILRB4Q8NHJ6 448 aa16.78■□□□□ 0.28
RTN1-202ENST00000342503 GLYATL2Q8WU03 294 aa16.78■□□□□ 0.28
RTN1-202ENST00000342503 MSI2Q96DH6 328 aaKnown RBP16.78■□□□□ 0.28
RTN1-202ENST00000342503 TP53RKQ96S44 253 aa16.78■□□□□ 0.28
RTN1-202ENST00000342503 VRK1Q99986 396 aaPredicted RBP16.78■□□□□ 0.28
RTN1-202ENST00000342503 RNF126Q9BV68 326 aa16.78■□□□□ 0.28
RTN1-202ENST00000342503 GSKIPQ9P0R6 139 aa16.78■□□□□ 0.28
RTN1-202ENST00000342503 ERRFI1Q9UJM3 462 aaPredicted RBP16.78■□□□□ 0.28
RTN1-202ENST00000342503 PCNX1Q96RV3 2341 aa16.78■□□□□ 0.28
RTN1-202ENST00000342503 IGHV3OR15-7A0A075B7D8 119 aa16.77■□□□□ 0.28
RTN1-202ENST00000342503 RP2O75695 350 aa16.77■□□□□ 0.28
RTN1-202ENST00000342503 LHBP01229 141 aa16.77■□□□□ 0.28
RTN1-202ENST00000342503 IFNA7P01567 189 aa16.77■□□□□ 0.28
RTN1-202ENST00000342503 ADIPOQQ15848 244 aa16.77■□□□□ 0.28
RTN1-202ENST00000342503 IAH1Q2TAA2 248 aaPredicted RBP16.77■□□□□ 0.28
RTN1-202ENST00000342503 C18orf12Q96KH6 178 aa16.77■□□□□ 0.28
RTN1-202ENST00000342503 SHARPINQ9H0F6 387 aa16.77■□□□□ 0.28
RTN1-202ENST00000342503 KCNIP1Q9NZI2 227 aa16.77■□□□□ 0.28
RTN1-202ENST00000342503 DNAJB11Q9UBS4 358 aa16.77■□□□□ 0.28
RTN1-202ENST00000342503 IL19Q9UHD0 177 aa16.77■□□□□ 0.28
RTN1-202ENST00000342503 ZDHHC8Q9ULC8 765 aa16.77■□□□□ 0.28
RTN1-202ENST00000342503 IGKV1D-17A0A075B6S4 117 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 A0A0D9SG52 128 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 H0YIZ8 118 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 OR4A8P0C604 315 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 ADAM5Q6NVV9 412 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 ACOT7LQ6ZUV0 252 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 LGI3Q8N145 548 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 KCNRGQ8N5I3 272 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 LHFPL5Q8TAF8 219 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 RNF222A6NCQ9 220 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 FAM90A27PA6NNH2 459 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 OR2F2O95006 317 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 TNFSF4P23510 183 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 OR2F1Q13607 317 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 LY6DQ14210 128 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 ZNF345Q14585 488 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 TESK1Q15569 626 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 KRBOX4Q5JUW0 171 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 LYZL2Q7Z4W2 148 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 KDF1Q8NAX2 398 aaPredicted RBP16.76■□□□□ 0.27
RTN1-202ENST00000342503 OR10V1Q8NGI7 309 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 DCUN1D4Q92564 292 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 GPHA2Q96T91 129 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 NGBQ9NPG2 151 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 UBQLN2Q9UHD9 624 aa16.76■□□□□ 0.27
RTN1-202ENST00000342503 KIAA2026Q5HYC2 2103 aa16.75■□□□□ 0.27
RTN1-202ENST00000342503 OOEPA6NGQ2 149 aa16.75■□□□□ 0.27
RTN1-202ENST00000342503 HSPA12AO43301 675 aa16.75■□□□□ 0.27
RTN1-202ENST00000342503 GABRA2P47869 451 aa16.75■□□□□ 0.27
RTN1-202ENST00000342503 GLIPR1P48060 266 aa16.75■□□□□ 0.27
RTN1-202ENST00000342503 RAB32Q13637 225 aa16.75■□□□□ 0.27
RTN1-202ENST00000342503 SNTB1Q13884 538 aaKnown RBP16.75■□□□□ 0.27
RTN1-202ENST00000342503 BEX5Q5H9J7 111 aa16.75■□□□□ 0.27
RTN1-202ENST00000342503 PRSS54Q6PEW0 395 aa16.75■□□□□ 0.27
RTN1-202ENST00000342503 FAM219AQ8IW50 185 aa16.75■□□□□ 0.27
RTN1-202ENST00000342503 OR1L1Q8NH94 360 aa16.75■□□□□ 0.27
RTN1-202ENST00000342503 SEBOXQ9HB31 216 aaPredicted RBP16.75■□□□□ 0.27
RTN1-202ENST00000342503 GCM1Q9NP62 436 aa16.75■□□□□ 0.27
RTN1-202ENST00000342503 FBXO9Q9UK97 447 aaPredicted RBP16.75■□□□□ 0.27
RTN1-202ENST00000342503 MAB21L2Q9Y586 359 aa16.75■□□□□ 0.27
RTN1-202ENST00000342503 C12orf77C9JDV5 145 aa16.74■□□□□ 0.27
RTN1-202ENST00000342503 KCNAB3O43448 404 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms