RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 TAF9BQ9HBM6 251 aa11.51□□□□□ -0.57
PMS1-201ENST00000342075 ZNF286AQ9HBT8 521 aa11.51□□□□□ -0.57
PMS1-201ENST00000342075 DLL4Q9NR61 685 aa11.51□□□□□ -0.57
PMS1-201ENST00000342075 TAS2R8Q9NYW2 309 aa11.51□□□□□ -0.57
PMS1-201ENST00000342075 TMEM30CPA0ZSE6 113 aa11.51□□□□□ -0.57
PMS1-201ENST00000342075 C12orf77C9JDV5 145 aa11.51□□□□□ -0.57
PMS1-201ENST00000342075 PHF1O43189 567 aaPredicted RBP11.51□□□□□ -0.57
PMS1-201ENST00000342075 NPY4RP50391 375 aa11.51□□□□□ -0.57
PMS1-201ENST00000342075 ATP5J2P56134 94 aa11.51□□□□□ -0.57
PMS1-201ENST00000342075 GAPTQ8N292 157 aa11.51□□□□□ -0.57
PMS1-201ENST00000342075 ODAMA1E959 279 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 FABP7O15540 132 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 TCRBP04435 133 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 MDH2P40926 338 aaKnown RBP11.5□□□□□ -0.57
PMS1-201ENST00000342075 CBX5P45973 191 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 OR3A3P47888 321 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 GNMTQ14749 295 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 MZT2BQ6NZ67 158 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 ZNF880Q6PDB4 577 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 OVCH2Q7RTZ1 564 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 POM121Q96HA1 1249 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 FLNBO75369 2602 aaKnown RBP11.5□□□□□ -0.57
PMS1-201ENST00000342075 NKX6-3A6NJ46 265 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 CENPXA8MT69 81 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 MGST3O14880 152 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 TSPAN5P62079 268 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 SSBP1Q04837 148 aaKnown RBP11.5□□□□□ -0.57
PMS1-201ENST00000342075 ZNF273Q14593 569 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 LDLRAD3Q86YD5 345 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 GINS4Q9BRT9 223 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 SLC23A1Q9UHI7 598 aa11.5□□□□□ -0.57
PMS1-201ENST00000342075 OR5H14A6NHG9 310 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 OR5H8P0DN80 308 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 P2RX3P56373 397 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 FXYD4P59646 89 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 CDK10Q15131 360 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 ATPAF1Q5TC12 328 aaPredicted RBP11.49□□□□□ -0.57
PMS1-201ENST00000342075 SHEQ5VZ18 495 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 SLC35E4Q6ICL7 350 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 LEAP2Q969E1 77 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 GPHA2Q96T91 129 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 ZNF2Q9BSG1 426 aaPredicted RBP11.49□□□□□ -0.57
PMS1-201ENST00000342075 MYOZ1Q9NP98 299 aaPredicted RBP11.49□□□□□ -0.57
PMS1-201ENST00000342075 MBNL3Q9NUK0 354 aaKnown RBP11.49□□□□□ -0.57
PMS1-201ENST00000342075 FBXO9Q9UK97 447 aaPredicted RBP11.49□□□□□ -0.57
PMS1-201ENST00000342075 TRDCB7Z8K6 153 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 ARPC1BO15143 372 aaKnown RBP11.49□□□□□ -0.57
PMS1-201ENST00000342075 MMP23AO75900 390 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 GOSR1O95249 250 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 RPS2P15880 293 aaKnown RBP11.49□□□□□ -0.57
PMS1-201ENST00000342075 CCL3L1P16619 93 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 ANXA7P20073 488 aaKnown RBP11.49□□□□□ -0.57
PMS1-201ENST00000342075 HLA-DRB3P79483 266 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 AADACL3Q5VUY0 350 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 ZNF841Q6ZN19 808 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 PEG10Q86TG7 708 aaKnown RBP11.49□□□□□ -0.57
PMS1-201ENST00000342075 TMEM17Q86X19 198 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 OR52L2PQ8NGH6 319 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 C20orf85Q9H1P6 137 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 HBZP02008 142 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 IFNA6P05013 189 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 GLAP06280 429 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 FCGR2CP31995 323 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 GPR6P46095 362 aaPredicted RBP11.49□□□□□ -0.57
PMS1-201ENST00000342075 Q6ZNX1 250 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 OR10V1Q8NGI7 309 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 MARCH1Q8TCQ1 289 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 RBMXL1Q96E39 390 aaKnown RBP11.49□□□□□ -0.57
PMS1-201ENST00000342075 DPAGT1Q9H3H5 408 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 VSIG4Q9Y279 399 aa11.49□□□□□ -0.57
PMS1-201ENST00000342075 ITPR3Q14573 2671 aa11.48□□□□□ -0.57
PMS1-201ENST00000342075 PRRC2AP48634 2157 aaKnown RBP11.48□□□□□ -0.57
PMS1-201ENST00000342075 IL2RGP31785 369 aa11.48□□□□□ -0.57
PMS1-201ENST00000342075 ZNF660Q6AZW8 331 aaPredicted RBP11.48□□□□□ -0.57
PMS1-201ENST00000342075 SLC36A1Q7Z2H8 476 aa11.48□□□□□ -0.57
PMS1-201ENST00000342075 CAPSLQ8WWF8 208 aa11.48□□□□□ -0.57
PMS1-201ENST00000342075 TOMM40LQ969M1 308 aa11.48□□□□□ -0.57
PMS1-201ENST00000342075 C14orf79Q96F83 325 aa11.48□□□□□ -0.57
PMS1-201ENST00000342075 TAS2R46P59540 309 aa11.48□□□□□ -0.57
PMS1-201ENST00000342075 PLET1Q6UQ28 207 aa11.48□□□□□ -0.57
PMS1-201ENST00000342075 TMED4Q7Z7H5 227 aa11.48□□□□□ -0.57
PMS1-201ENST00000342075 DUSP18Q8NEJ0 188 aa11.48□□□□□ -0.57
PMS1-201ENST00000342075 ARL11Q969Q4 196 aa11.48□□□□□ -0.57
PMS1-201ENST00000342075 TRBV6-6A0A0A6YYG2 114 aa11.47□□□□□ -0.57
PMS1-201ENST00000342075 NDUFB3O43676 98 aa11.47□□□□□ -0.57
PMS1-201ENST00000342075 FAUP35544 74 aaKnown RBP11.47□□□□□ -0.57
PMS1-201ENST00000342075 VAX1Q5SQQ9 334 aa11.47□□□□□ -0.57
PMS1-201ENST00000342075 RAB1CQ92928 201 aa11.47□□□□□ -0.57
PMS1-201ENST00000342075 NECAP2Q9NVZ3 263 aa11.47□□□□□ -0.57
PMS1-201ENST00000342075 ZNRD1Q9P1U0 126 aa11.47□□□□□ -0.57
PMS1-201ENST00000342075 EDARQ9UNE0 448 aa11.47□□□□□ -0.57
PMS1-201ENST00000342075 IGHV4-30-2A0A087WSY4 118 aa11.47□□□□□ -0.57
PMS1-201ENST00000342075 IGKV1D-13A0A0B4J2D9 117 aa11.47□□□□□ -0.57
PMS1-201ENST00000342075 C15orf65H3BRN8 121 aa11.47□□□□□ -0.57
PMS1-201ENST00000342075 RLN1P04808 185 aa11.47□□□□□ -0.57
PMS1-201ENST00000342075 IGKV1-13P0DP09 117 aa11.47□□□□□ -0.57
PMS1-201ENST00000342075 AADACP22760 399 aa11.47□□□□□ -0.57
PMS1-201ENST00000342075 RPL31P62899 125 aaKnown RBP11.47□□□□□ -0.57
PMS1-201ENST00000342075 MRPS11P82912 194 aaKnown RBP11.47□□□□□ -0.57
PMS1-201ENST00000342075 HMGN3Q15651 99 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms