RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 TVP23AA6NH52 213 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 FAM220BPB1ANY3 271 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 TXNDC12O95881 172 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 IL6P05231 212 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 LBPP18428 481 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 DUSP1P28562 367 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 CD40LGP29965 261 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 PRKCDQ05655 676 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 TMEM267Q0VDI3 215 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-201ENST00000340660 TMEM30BQ3MIR4 351 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 AKIRIN2Q53H80 203 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 PPP1R27Q86WC6 154 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 LFNGQ8NES3 379 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 OR5B3Q8NH48 314 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 COQ2Q96H96 371 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 PGAM5Q96HS1 289 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 GPX7Q96SL4 187 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-201ENST00000340660 NMNAT3Q96T66 252 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 OSBPL10Q9BXB5 764 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 MTCH1Q9NZJ7 389 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 DKK2Q9UBU2 259 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 GAB2Q9UQC2 676 aa7.83□□□□□ -1.16
ATXN3-201ENST00000340660 LPAP08519 4548 aa7.82□□□□□ -1.16
ATXN3-201ENST00000340660 PQLC2LA1A4F0 135 aa7.82□□□□□ -1.16
ATXN3-201ENST00000340660 CXCR6O00574 342 aa7.82□□□□□ -1.16
ATXN3-201ENST00000340660 NUDT3O95989 172 aa7.82□□□□□ -1.16
ATXN3-201ENST00000340660 IFNA5P01569 189 aa7.82□□□□□ -1.16
ATXN3-201ENST00000340660 TCP1P17987 556 aaKnown RBP7.82□□□□□ -1.16
ATXN3-201ENST00000340660 GRB2P62993 217 aaKnown RBP7.82□□□□□ -1.16
ATXN3-201ENST00000340660 ZNF691Q5VV52 312 aa7.82□□□□□ -1.16
ATXN3-201ENST00000340660 OR2C3Q8N628 320 aa7.82□□□□□ -1.16
ATXN3-201ENST00000340660 POC5Q8NA72 575 aa7.82□□□□□ -1.16
ATXN3-201ENST00000340660 ABHD5Q8WTS1 349 aa7.82□□□□□ -1.16
ATXN3-201ENST00000340660 GTF2H4Q92759 462 aa7.82□□□□□ -1.16
ATXN3-201ENST00000340660 TAMM41Q96BW9 452 aa7.82□□□□□ -1.16
ATXN3-201ENST00000340660 AKIP1Q9NQ31 210 aa7.82□□□□□ -1.16
ATXN3-201ENST00000340660 CALYQ9NYX4 217 aa7.82□□□□□ -1.16
ATXN3-201ENST00000340660 IDI2-AS1Q9NZ38 188 aa7.82□□□□□ -1.16
ATXN3-201ENST00000340660 RPL36Q9Y3U8 105 aaKnown RBP7.82□□□□□ -1.16
ATXN3-201ENST00000340660 LOC110117498-PIK3R3F6TDL0 507 aa7.81□□□□□ -1.16
ATXN3-201ENST00000340660 SIRPB1O00241 398 aa7.81□□□□□ -1.16
ATXN3-201ENST00000340660 NBR2O15453 112 aa7.81□□□□□ -1.16
ATXN3-201ENST00000340660 TMEM127O75204 238 aa7.81□□□□□ -1.16
ATXN3-201ENST00000340660 NDUFB2O95178 105 aa7.81□□□□□ -1.16
ATXN3-201ENST00000340660 CBLN1P23435 193 aa7.81□□□□□ -1.16
ATXN3-201ENST00000340660 HSD11B1P28845 292 aa7.81□□□□□ -1.16
ATXN3-201ENST00000340660 HTR1FP30939 366 aa7.81□□□□□ -1.16
ATXN3-201ENST00000340660 FXYD6P3P58550 94 aa7.81□□□□□ -1.16
ATXN3-201ENST00000340660 KRTAP10-4P60372 401 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-201ENST00000340660 MED22Q15528 200 aa7.81□□□□□ -1.16
ATXN3-201ENST00000340660 CD300LFQ8TDQ1 290 aa7.81□□□□□ -1.16
ATXN3-201ENST00000340660 ZNRF4Q8WWF5 429 aa7.81□□□□□ -1.16
ATXN3-201ENST00000340660 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.81□□□□□ -1.16
ATXN3-201ENST00000340660 SNAPC3Q92966 411 aa7.81□□□□□ -1.16
ATXN3-201ENST00000340660 CNN2Q99439 309 aaKnown RBP7.81□□□□□ -1.16
ATXN3-201ENST00000340660 POLR2J2Q9GZM3 115 aaKnown RBP7.81□□□□□ -1.16
ATXN3-201ENST00000340660 POLR2J3Q9H1A7 115 aaKnown RBP7.81□□□□□ -1.16
ATXN3-201ENST00000340660 NIPAL2Q9H841 368 aa7.81□□□□□ -1.16
ATXN3-201ENST00000340660 RNF150Q9ULK6 438 aa7.81□□□□□ -1.16
ATXN3-201ENST00000340660 UTP11Q9Y3A2 253 aaKnown RBP7.81□□□□□ -1.16
ATXN3-201ENST00000340660 TNFRSF18Q9Y5U5 241 aa7.81□□□□□ -1.16
ATXN3-201ENST00000340660 FCN1O00602 326 aa7.8□□□□□ -1.16
ATXN3-201ENST00000340660 INMTO95050 263 aa7.8□□□□□ -1.16
ATXN3-201ENST00000340660 CLEC2LP0C7M8 214 aa7.8□□□□□ -1.16
ATXN3-201ENST00000340660 SLC15A1P46059 708 aa7.8□□□□□ -1.16
ATXN3-201ENST00000340660 IL24Q13007 206 aa7.8□□□□□ -1.16
ATXN3-201ENST00000340660 TMEM187Q14656 261 aa7.8□□□□□ -1.16
ATXN3-201ENST00000340660 FKBP9P1Q75LS8 142 aa7.8□□□□□ -1.16
ATXN3-201ENST00000340660 FAM81AQ8TBF8 368 aa7.8□□□□□ -1.16
ATXN3-201ENST00000340660 SLAMF9Q96A28 289 aa7.8□□□□□ -1.16
ATXN3-201ENST00000340660 CEP19Q96LK0 163 aa7.8□□□□□ -1.16
ATXN3-201ENST00000340660 A0A087WUV0 522 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-201ENST00000340660 DHRS12A0PJE2 317 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 GAGE12BA1L429 117 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 FUOMA2VDF0 154 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 GAGE12HA6NDE8 117 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 IL1AP01583 271 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 PYCR1P32322 319 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 NHLH2Q02577 135 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 BNIP1Q12981 228 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 BTNL8Q6UX41 500 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 MSANTD1Q6ZTZ1 278 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 ASRGL1Q7L266 308 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 SLC38A6Q8IZM9 456 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 NPBQ8NG41 125 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 RFESDQ8TAC1 157 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 NTN5Q8WTR8 489 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-201ENST00000340660 FAM210BQ96KR6 192 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 ZNF251Q9BRH9 671 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 PKIBQ9C010 78 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 LINC00574Q9H8X3 128 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 CORO2BQ9UQ03 480 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 SH3GLB1Q9Y371 365 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 TMED3Q9Y3Q3 217 aa7.79□□□□□ -1.16
ATXN3-201ENST00000340660 TMEM213A2RRL7 107 aa7.78□□□□□ -1.16
ATXN3-201ENST00000340660 NPIPB11E5RHQ5 1161 aa7.78□□□□□ -1.16
ATXN3-201ENST00000340660 H3BUA1 57 aa7.78□□□□□ -1.16
ATXN3-201ENST00000340660 NDUFA3O95167 84 aa7.78□□□□□ -1.16
ATXN3-201ENST00000340660 CA1P00915 261 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-201ENST00000340660 GLP1RP43220 463 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms