RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 HSD17B6O14756 317 aa18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 TUSC2O75896 110 aa18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 FAM201AQ5SY85 155 aa18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 SLC5A7Q9GZV3 580 aa18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 ARL6Q9H0F7 186 aa18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 GSKIPQ9P0R6 139 aa18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 TRBV6-7A0A0A0MS04 114 aa18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 NKX2-6A6NCS4 301 aa18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 CFDP00746 253 aaPredicted RBP18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 IGHV1-46P01743 117 aa18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 TMUB2Q71RG4 321 aa18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 GAPTQ8N292 157 aa18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 ZCCHC24Q8N2G6 241 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 ZNF565Q8N9K5 539 aa18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 PRORYQ9H606 182 aa18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 TAF9BQ9HBM6 251 aa18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 CCL28Q9NRJ3 127 aa18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 KIF25Q9UIL4 384 aa18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 PCDHB10Q9UN67 800 aa18.84■□□□□ 0.61
PDLIM2-203ENST00000339162 SRRM5B3KS81 715 aa18.83■□□□□ 0.6
PDLIM2-203ENST00000339162 H7C1Q1 480 aa18.83■□□□□ 0.6
PDLIM2-203ENST00000339162 OR4A8P0C604 315 aa18.83■□□□□ 0.6
PDLIM2-203ENST00000339162 KCNJ3P48549 501 aa18.83■□□□□ 0.6
PDLIM2-203ENST00000339162 TMEM187Q14656 261 aa18.83■□□□□ 0.6
PDLIM2-203ENST00000339162 PHF1O43189 567 aaPredicted RBP18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 PSG2P11465 335 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 GRNP28799 593 aaKnown RBP18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 S100A11P31949 105 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 OR3A1P47881 315 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 TNFAIP6P98066 277 aaPredicted RBP18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 ADIPOQQ15848 244 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 ZNF680Q8NEM1 530 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 COQ2Q96H96 371 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 TP53RKQ96S44 253 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 NMES1Q9C002 83 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 MBD2Q9UBB5 411 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 DNAJB11Q9UBS4 358 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 ERRFI1Q9UJM3 462 aaPredicted RBP18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 WIPI2Q9Y4P8 454 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 TNFSF12O43508 249 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 PSMB6P28072 239 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 PRDX2P32119 198 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 HTR2BP41595 481 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 GABRA2P47869 451 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 CDSNQ15517 529 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 BEX5Q5H9J7 111 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 GLYATL2Q8WU03 294 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 GALNT14Q96FL9 552 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 CABLES2Q9BTV7 478 aa18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 MBNL3Q9NUK0 354 aaKnown RBP18.82■□□□□ 0.6
PDLIM2-203ENST00000339162 IGKV1D-17A0A075B6S4 117 aa18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 TMEM30CPA0ZSE6 113 aa18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 TGIF2LYQ8IUE0 185 aa18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 H1FOOQ8IZA3 346 aaPredicted RBP18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 KDF1Q8NAX2 398 aaPredicted RBP18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 PRR7Q8TB68 274 aa18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 SHARPINQ9H0F6 387 aa18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 PARP12Q9H0J9 701 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 MPPED1O15442 326 aa18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 HSPA12AO43301 675 aa18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 GLIPR1P48060 266 aa18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 FAM53AQ6NSI3 398 aaPredicted RBP18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 MEX3BQ6ZN04 569 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 MOB1BQ7L9L4 216 aa18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 LYZL2Q7Z4W2 148 aa18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 TBC1D26Q86UD7 250 aa18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 CCDC71LQ8N9Z2 235 aa18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 LINC01560Q8TB33 94 aa18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 THAP6Q8TBB0 222 aa18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 GCM1Q9NP62 436 aa18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 OR2W1Q9Y3N9 320 aa18.81■□□□□ 0.6
PDLIM2-203ENST00000339162 RPA2P15927 270 aa18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 ASCL1P50553 236 aa18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 GGNBP1Q5YKI7 109 aa18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 ZNF767PQ75MW2 155 aa18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 LHFPL5Q8TAF8 219 aa18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 NEUROG1Q92886 237 aa18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 PKDREJQ9NTG1 2253 aa18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 C3orf85A0A1B0GTC6 90 aa18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 H0YIZ8 118 aa18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 ERVH48-1M5A8F1 160 aa18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 SLC25A4P12235 298 aa18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 CCL8P80075 99 aa18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 CYCSP99999 105 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 EXOSC2Q13868 293 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 IAH1Q2TAA2 248 aaPredicted RBP18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 OR10Z1Q8NGY1 313 aa18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 OR1L1Q8NH94 360 aa18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 MRGPRDQ8TDS7 321 aa18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 MSI2Q96DH6 328 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 C2orf50Q96LR7 162 aa18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 TNFSF18Q9UNG2 199 aa18.8■□□□□ 0.6
PDLIM2-203ENST00000339162 IFNL4K9M1U5 179 aa18.79■□□□□ 0.6
PDLIM2-203ENST00000339162 GPR31O00270 319 aa18.79■□□□□ 0.6
PDLIM2-203ENST00000339162 CD80P33681 288 aa18.79■□□□□ 0.6
PDLIM2-203ENST00000339162 EDDM3AQ14507 147 aa18.79■□□□□ 0.6
PDLIM2-203ENST00000339162 KRBOX4Q5JUW0 171 aa18.79■□□□□ 0.6
PDLIM2-203ENST00000339162 FOXRED2Q8IWF2 684 aa18.79■□□□□ 0.6
PDLIM2-203ENST00000339162 PCNPQ8WW12 178 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-203ENST00000339162 RNF126Q9BV68 326 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms