RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 PRDX4Q13162 271 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 PMS2P11Q13670 270 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 DMBX1Q8NFW5 382 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 GINS3Q9BRX5 216 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 TUBD1Q9UJT1 453 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 NBASA2RRP1 2371 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 SPTA1P02549 2419 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 MAP1LC3B2A6NCE7 125 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 PROB1E7EW31 1015 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 IFNA1P01562 189 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 SERPINA7P05543 415 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 H3F3AP84243 136 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 ZNF574Q6ZN55 896 aaPredicted RBP12.2□□□□□ -0.46
PCDH8-201ENST00000338862 OR10D3Q8NH80 312 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 ADGRG7Q96K78 797 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 MAP1LC3BQ9GZQ8 125 aa12.2□□□□□ -0.46
PCDH8-201ENST00000338862 SYNGR1O43759 233 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 SRP19P09132 144 aaKnown RBP12.19□□□□□ -0.46
PCDH8-201ENST00000338862 HEPN1Q6WQI6 88 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 RABEPKQ7Z6M1 372 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 ZNF441Q8N8Z8 693 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 MSI2Q96DH6 328 aaKnown RBP12.19□□□□□ -0.46
PCDH8-201ENST00000338862 FUT9Q9Y231 359 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 DEFB108AA8MXU0 73 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 CA6P23280 308 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 SRPXP78539 464 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 ARF1P84077 181 aaKnown RBP12.19□□□□□ -0.46
PCDH8-201ENST00000338862 RAB35Q15286 201 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 ELOBQ15370 118 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 SNIP1Q8TAD8 396 aaKnown RBP12.19□□□□□ -0.46
PCDH8-201ENST00000338862 TMEM222Q9H0R3 208 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 ZNF576Q9H609 170 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 A0A1W2PR77 199 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 CLEC18AA5D8T8 446 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 FAM3BP58499 235 aaPredicted RBP12.19□□□□□ -0.46
PCDH8-201ENST00000338862 RAB4BP61018 213 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 CLEC18CQ8NCF0 446 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 OR13D1Q8NGV5 346 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 KIAA1456Q9P272 454 aa12.19□□□□□ -0.46
PCDH8-201ENST00000338862 HEATR1Q9H583 2144 aaKnown RBP12.18□□□□□ -0.46
PCDH8-201ENST00000338862 USF3Q68DE3 2245 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 A0A1W2PNV4 684 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 DEGS1O15121 323 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 ZNF737O75373 536 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 VAMP5O95183 116 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 HOXA5P20719 270 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 VDAC1P21796 283 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 LTBRP36941 435 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 RBM11P57052 281 aaKnown RBP12.18□□□□□ -0.46
PCDH8-201ENST00000338862 MOB3AQ96BX8 217 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 MUCL1Q96DR8 90 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 A0A0G2JMM0 328 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 A0A0U1RQV5 110 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 A0A1W2PPB8 328 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 A0A1W2PRS3 328 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 ANKRD30BLA7E2S9 258 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 KIR3DP1A8MWS1 328 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 DFFBO76075 338 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 NGFP01138 241 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 CFPP27918 469 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 GPX4P36969 197 aaPredicted RBP12.18□□□□□ -0.46
PCDH8-201ENST00000338862 FAM185AQ8N0U4 392 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 FAM131CQ96AQ9 280 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 K7N7A8 449 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 DVL1O14640 695 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 YKT6O15498 198 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 SNRPCP09234 159 aaKnown RBP12.18□□□□□ -0.46
PCDH8-201ENST00000338862 SPINK14Q6IE38 97 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 SELENOHQ8IZQ5 122 aaKnown RBP12.18□□□□□ -0.46
PCDH8-201ENST00000338862 IFI44Q8TCB0 444 aa12.18□□□□□ -0.46
PCDH8-201ENST00000338862 A0A1W2PQM1 296 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 RFPL3SP0C7P2 107 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 NDUFB7P17568 137 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 FOLR3P41439 243 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 HBG1P69891 147 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 HBG2P69892 147 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 BTNL3Q6UXE8 466 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 NFAM1Q8NET5 270 aaPredicted RBP12.17□□□□□ -0.46
PCDH8-201ENST00000338862 PCGF1Q9BSM1 259 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 GPR87Q9BY21 358 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 IGHV3-43A0A0B4J1X8 118 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 IGHV3-43DP0DP04 118 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 RPL29P47914 159 aaKnown RBP12.17□□□□□ -0.46
PCDH8-201ENST00000338862 ICAM4Q14773 271 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 C21orf62-AS1Q17RA5 79 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 UNQ6494/PRO21346Q6UXR6 183 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 TMPRSS7Q7RTY8 843 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 ZDHHC23Q8IYP9 409 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 NINJ1Q92982 152 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 MALSU1Q96EH3 234 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 ATP5SQ99766 215 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 RBKSQ9H477 322 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 TUBA4BQ9H853 241 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 OR1A1Q9P1Q5 309 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 DMRT1Q9Y5R6 373 aa12.17□□□□□ -0.46
PCDH8-201ENST00000338862 ARGFXA6NJG6 315 aa12.16□□□□□ -0.46
PCDH8-201ENST00000338862 CD55P08174 381 aa12.16□□□□□ -0.46
PCDH8-201ENST00000338862 DTYMKP23919 212 aa12.16□□□□□ -0.46
PCDH8-201ENST00000338862 DDTP30046 118 aa12.16□□□□□ -0.46
PCDH8-201ENST00000338862 IL2RGP31785 369 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms