RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 SMIM19Q96E16 107 aa10.59□□□□□ -0.71
NUDCD3-201ENST00000338427 AKR1E2Q96JD6 320 aa10.59□□□□□ -0.71
NUDCD3-201ENST00000338427 PGLYRP3Q96LB9 341 aa10.59□□□□□ -0.71
NUDCD3-201ENST00000338427 BANF2Q9H503 90 aa10.59□□□□□ -0.71
NUDCD3-201ENST00000338427 EXOSC1Q9Y3B2 195 aaKnown RBP10.59□□□□□ -0.71
NUDCD3-201ENST00000338427 TSSC4Q9Y5U2 329 aaPredicted RBP10.59□□□□□ -0.71
NUDCD3-201ENST00000338427 TRBV5-7A0A0A0MS05 114 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 OOSP1A8MZH6 123 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 ANKRD65E5RJM6 399 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 IGKV1D-33P01593 117 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 IGKV1-33P01594 117 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 MAS1P04201 325 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 PF4V1P10720 104 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 TMEM11P17152 192 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 KRTAP10-11P60412 298 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 PPP3R1P63098 170 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 INSL4Q14641 139 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 CCDC144NLQ6NUI1 221 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 GLIPR1L1Q6UWM5 242 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 OR4K15Q8NH41 348 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 CREB3L1Q96BA8 519 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 OR14A2Q96R54 314 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 S100A13Q99584 98 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 NECAP2Q9NVZ3 263 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 IL36GQ9NZH8 169 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 MOB4Q9Y3A3 225 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 HSPE1-MOB4S4R3N1 261 aa10.58□□□□□ -0.72
NUDCD3-201ENST00000338427 DNAH9Q9NYC9 4486 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 TMEM30CPA0ZSE6 113 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 PSMB11A5LHX3 300 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 GPX5O75715 221 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 MPIG6BO95866 241 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 MYL12AP19105 171 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 GZMHP20718 246 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 ARHGDIBP52566 201 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 ZNF134P52741 427 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 LOXL3P58215 753 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 MADCAM1Q13477 382 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 RIPK1Q13546 671 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 Q499Y3 187 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 NHLRC3Q5JS37 347 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 TTC23Q5W5X9 447 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 JAGN1Q8N5M9 183 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 C5orf56Q8N8D9 126 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 TMEM104Q8NE00 496 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 OR10X1Q8NGY0 326 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 HAVCR2Q8TDQ0 301 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 NEK7Q8TDX7 302 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 EAF1Q96JC9 268 aaPredicted RBP10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 RDH12Q96NR8 316 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 IFT22Q9H7X7 185 aa10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 MRPS28Q9Y2Q9 187 aaKnown RBP10.57□□□□□ -0.72
NUDCD3-201ENST00000338427 IGHV1-3A0A0C4DH29 117 aa10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 UBE2QL1A1L167 161 aa10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 CCRL2O00421 344 aa10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 SDCBPO00560 298 aaPredicted RBP10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 PF4P02776 101 aa10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 HOXD3P31249 432 aaPredicted RBP10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 KCNJ3P48549 501 aa10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 PAX5Q02548 391 aa10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 RCN1Q15293 331 aa10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 SYT6Q5T7P8 510 aaPredicted RBP10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 ZNF497Q6ZNH5 498 aa10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 LCNL1Q6ZST4 164 aa10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 LYPD6Q86Y78 171 aa10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 BPIFB6Q8NFQ5 453 aa10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 OR10V1Q8NGI7 309 aa10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 OR1L1Q8NH94 360 aa10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 CPNE2Q96FN4 548 aaPredicted RBP10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 DUX3Q96PT4 197 aa10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 CHCHD3Q9NX63 227 aaKnown RBP10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 GFOD1Q9NXC2 390 aa10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 AMMECR1Q9Y4X0 333 aaPredicted RBP10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 PEX16Q9Y5Y5 336 aa10.56□□□□□ -0.72
NUDCD3-201ENST00000338427 WI2-2373I1.2A0A1W2PRP0 233 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 SERPINE3A8MV23 424 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 C12orf77C9JDV5 145 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 K7EIL1 84 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 HSD17B6O14756 317 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 GAPDHP04406 335 aaKnown RBP10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 GTF2F2P13984 249 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 RCC1P18754 421 aaPredicted RBP10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 CELP19835 753 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 RAB7AP51149 207 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 GP2P55259 537 aaKnown RBP10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 YIF1BQ5BJH7 314 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 CT45A1Q5HYN5 189 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 SIGIRRQ6IA17 410 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 ETV3LQ6ZN32 361 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 SLC16A12Q6ZSM3 486 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 OR8H3Q8N146 312 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 PRR18Q8N4B5 295 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 OR10A7Q8NGE5 316 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 OR4X2Q8NGF9 303 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 CT45A3Q8NHU0 189 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 ST6GALNAC6Q969X2 333 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 SELENOIQ9C0D9 397 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 PLSCR3Q9NRY6 295 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 PSORS1C1Q9UIG5 152 aa10.55□□□□□ -0.72
NUDCD3-201ENST00000338427 IRGMA1A4Y4 181 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms