RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 PSPNO60542 156 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 TUSC2O75896 110 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 TMEM50AO95807 157 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 CST4P01036 141 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 PRH1P02810 166 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 PET100P0DJ07 73 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 AESQ08117 197 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 LGI3Q8N145 548 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 C18orf12Q96KH6 178 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 OR51I2Q9H344 312 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 LPAR3Q9UBY5 353 aa7.51□□□□□ -1.21
SNCA-201ENST00000336904 IGSF23A1L1A6 192 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 WRBO00258 174 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 GPR37O15354 613 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 IAPPP10997 89 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 KIR2DL2P43627 348 aaPredicted RBP7.5□□□□□ -1.21
SNCA-201ENST00000336904 PPT1P50897 306 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 TMEM267Q0VDI3 215 aaPredicted RBP7.5□□□□□ -1.21
SNCA-201ENST00000336904 SPINK9Q5DT21 86 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 FAM201AQ5SY85 155 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 BTNL3Q6UXE8 466 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 FAM214BQ7L5A3 538 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 LRP11Q86VZ4 500 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 DMBX1Q8NFW5 382 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 STOML3Q8TAV4 291 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 KLF14Q8TD94 323 aaPredicted RBP7.5□□□□□ -1.21
SNCA-201ENST00000336904 MARVELD3Q96A59 401 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 RSRP1Q9BUV0 290 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 NKX6-2Q9C056 277 aaPredicted RBP7.5□□□□□ -1.21
SNCA-201ENST00000336904 RHOFQ9HBH0 211 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 SPTBN4Q9H254 2564 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 TMEM218A2RU14 115 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 TRDCB7Z8K6 153 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 DNASE2O00115 360 aaPredicted RBP7.5□□□□□ -1.21
SNCA-201ENST00000336904 MLNRO43193 412 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 SS18L1O75177 396 aaPredicted RBP7.5□□□□□ -1.21
SNCA-201ENST00000336904 CA11O75493 328 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 DAOP14920 347 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 UCP2P55851 309 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 EDDM3AQ14507 147 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 ZNF273Q14593 569 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 GNMTQ14749 295 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 OR8G1Q15617 311 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 PCSK4Q6UW60 755 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 Q6ZR03 302 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 CCDC54Q8NEL0 328 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 OR10V1Q8NGI7 309 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 OR10J5Q8NHC4 309 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 ARL11Q969Q4 196 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 FAM234AQ9H0X4 552 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 ASH1LQ9NR48 2969 aaKnown RBP7.5□□□□□ -1.21
SNCA-201ENST00000336904 DECR2Q9NUI1 292 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 TUBD1Q9UJT1 453 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 DCHS2Q6V1P9 2916 aa7.5□□□□□ -1.21
SNCA-201ENST00000336904 IGHV3OR15-7A0A075B7D8 119 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 FGF16O43320 207 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 GALR2O43603 387 aaPredicted RBP7.49□□□□□ -1.21
SNCA-201ENST00000336904 GLAP06280 429 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 ZNF83P51522 516 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 GABRA6Q16445 453 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 MIDNQ504T8 468 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 PIP4P1Q86T03 277 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 ZNF573Q86YE8 665 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 SELENOHQ8IZQ5 122 aaKnown RBP7.49□□□□□ -1.21
SNCA-201ENST00000336904 PHYHIPLQ96FC7 376 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 GMPPAQ96IJ6 420 aaPredicted RBP7.49□□□□□ -1.21
SNCA-201ENST00000336904 AKR1E2Q96JD6 320 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 TMEM222Q9H0R3 208 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 ARFGEF3Q5TH69 2177 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 ST8SIA3O43173 380 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 CECR9P0C854 216 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 HOXC12P31275 282 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 TAGLNQ01995 201 aaKnown RBP7.49□□□□□ -1.21
SNCA-201ENST00000336904 Q6ZRM9 215 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 OR1L1Q8NH94 360 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 FAM213BQ8TBF2 198 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 TMEM171Q8WVE6 324 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 NANOS1Q8WY41 292 aaKnown RBP7.49□□□□□ -1.21
SNCA-201ENST00000336904 PIGMQ9H3S5 423 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 GP6Q9HCN6 339 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 GLRX2Q9NS18 164 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 MED9Q9NWA0 146 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 CLCF1Q9UBD9 225 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 FBXO7Q9Y3I1 522 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 ATP23Q9Y6H3 246 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 KIAA1324LA8MWY0 1029 aaPredicted RBP7.49□□□□□ -1.21
SNCA-201ENST00000336904 ATP6V1G2-DDX39BF2Z307 99 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 H7C1Q1 480 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 TIMM8AO60220 97 aaPredicted RBP7.49□□□□□ -1.21
SNCA-201ENST00000336904 PGLYRP1O75594 196 aaPredicted RBP7.49□□□□□ -1.21
SNCA-201ENST00000336904 ATG12O94817 140 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 LYL1P12980 280 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 PPP1CCP36873 323 aaKnown RBP7.49□□□□□ -1.21
SNCA-201ENST00000336904 PMELP40967 661 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 NKX2-1P43699 371 aaPredicted RBP7.49□□□□□ -1.21
SNCA-201ENST00000336904 EWSR1Q01844 656 aaKnown RBP eCLIP7.49□□□□□ -1.21
SNCA-201ENST00000336904 MSMPQ1L6U9 139 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 SWI5Q1ZZU3 235 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 NRN1LQ496H8 165 aa7.49□□□□□ -1.21
SNCA-201ENST00000336904 CCDC71LQ8N9Z2 235 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms