RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 CNIH1O95406 144 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 CT45A6P0DMU7 189 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 CT45A5P0DMU8 189 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 CT45A7P0DMV0 189 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 SPINK2P20155 84 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 NPBWR1P48145 328 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 SCGB2A2Q13296 93 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 CT45A1Q5HYN5 189 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 Q6ZRG5 221 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 C9orf106Q8NAJ2 232 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 OR10AD1Q8NGE0 317 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 OR8B3Q8NGG8 313 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 OR10V1Q8NGI7 309 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 CT45A3Q8NHU0 189 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 PPP1R1CQ8WVI7 109 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 OR8B2Q96RD0 313 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 NPDC1Q9NQX5 325 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-201ENST00000335508 SLC2A9Q9NRM0 540 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 FREM1Q5H8C1 2179 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 KRBOX1C9JBD0 128 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 SHOXO15266 292 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 CRYZL1O95825 349 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 APOC3P02656 99 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 APOBEC3AP31941 199 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-201ENST00000335508 ZNF154Q13106 437 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 ELP2Q6IA86 826 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 FYTTD1Q96QD9 318 aaKnown RBP5.91□□□□□ -1.46
SF3B1-201ENST00000335508 PPP1R14DQ9NXH3 145 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 SPDEFO95238 335 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 SFT2D2O95562 160 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 KRASP01116 189 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 ADRB1P08588 477 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 RPL12P30050 165 aaKnown RBP5.91□□□□□ -1.46
SF3B1-201ENST00000335508 KIR2DL2P43627 348 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-201ENST00000335508 KIR2DS2P43631 304 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 PLAURQ03405 335 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 SNTB1Q13884 538 aaKnown RBP5.91□□□□□ -1.46
SF3B1-201ENST00000335508 ZNF79Q15937 498 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 CLEC2AQ6UVW9 174 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 ABHD14BQ96IU4 210 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 V9GYH0 126 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 RFPL4AA6NLU0 287 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 RFPL4AL1F8VTS6 287 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 CRYGSP22914 178 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 AKR1C1Q04828 323 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 DMRTC1Q5HYR2 192 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 MAFIPQ8WZ33 124 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 MRPL24Q96A35 216 aaKnown RBP5.91□□□□□ -1.46
SF3B1-201ENST00000335508 SULT4A1Q9BR01 284 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 SLC35D1Q9NTN3 355 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 CLCF1Q9UBD9 225 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 RAXQ9Y2V3 346 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 A0A1B0GVG6 124 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 MFNGO00587 321 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 CLPSP04118 112 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 CHATP28329 748 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 RPS16P62249 146 aaKnown RBP5.91□□□□□ -1.46
SF3B1-201ENST00000335508 GUCA2AQ02747 115 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 ZNF260Q3ZCT1 412 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 FOXL2NBQ6ZUU3 175 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 ERASQ7Z444 233 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 NEU4Q8WWR8 484 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-201ENST00000335508 OR2V2Q96R30 315 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 KLK13Q9UKR3 277 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 NYNRINQ9P2P1 1898 aaKnown RBP5.91□□□□□ -1.46
SF3B1-201ENST00000335508 A0A0G2JMM0 328 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 A0A1W2PPB8 328 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 RPS10-NUDT3A0A1W2PQS6 291 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 A0A1W2PRS3 328 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 KIR3DP1A8MWS1 328 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 AADACP22760 399 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 PEA15Q15121 130 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 MIDNQ504T8 468 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 SHEQ5VZ18 495 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 ITLN1Q8WWA0 313 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 ST8SIA4Q92187 359 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 SNRNP40Q96DI7 357 aaKnown RBP5.91□□□□□ -1.46
SF3B1-201ENST00000335508 A0A1W2PN81 502 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 TMPRSS2O15393 492 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 FBXO24O75426 580 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 CHRNA7P36544 502 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 COMPP49747 757 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-201ENST00000335508 UBE2V2Q15819 145 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 VWA1Q6PCB0 445 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 OVCH2Q7RTZ1 564 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 WBP1Q96G27 269 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 OPN4Q9UHM6 478 aa5.91□□□□□ -1.46
SF3B1-201ENST00000335508 COX5AP20674 150 aa5.9□□□□□ -1.46
SF3B1-201ENST00000335508 PSG7Q13046 419 aa5.9□□□□□ -1.46
SF3B1-201ENST00000335508 COMMD1Q8N668 190 aa5.9□□□□□ -1.46
SF3B1-201ENST00000335508 MRGPRDQ8TDS7 321 aa5.9□□□□□ -1.46
SF3B1-201ENST00000335508 RGP1Q92546 391 aaPredicted RBP5.9□□□□□ -1.46
SF3B1-201ENST00000335508 SLC39A9Q9NUM3 307 aa5.9□□□□□ -1.46
SF3B1-201ENST00000335508 PSG11Q9UQ72 335 aa5.9□□□□□ -1.46
SF3B1-201ENST00000335508 PTHLHP12272 177 aa5.9□□□□□ -1.46
SF3B1-201ENST00000335508 UCP3P55916 312 aa5.9□□□□□ -1.46
SF3B1-201ENST00000335508 Q0VFX4 171 aa5.9□□□□□ -1.46
SF3B1-201ENST00000335508 PPP1R1AQ13522 171 aa5.9□□□□□ -1.46
SF3B1-201ENST00000335508 SOHLH1Q5JUK2 328 aa5.9□□□□□ -1.46
SF3B1-201ENST00000335508 SEZ6L2Q6UXD5 910 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms