RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 MRPS34P82930 218 aaKnown RBP11.97□□□□□ -0.49
SF1-202ENST00000334944 PAX5Q02548 391 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 CHRFAM7AQ494W8 412 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 SLC16A14Q7RTX9 510 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 OR1F12Q8NHA8 337 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 PSMF1Q92530 271 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 HAS2Q92819 552 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 WNT5BQ9H1J7 359 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 TMEM38BQ9NVV0 291 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 GAB2Q9UQC2 676 aa11.97□□□□□ -0.49
SF1-202ENST00000334944 KIAA1549Q9HCM3 1950 aa11.96□□□□□ -0.49
SF1-202ENST00000334944 A0A0U1RQV5 110 aa11.96□□□□□ -0.49
SF1-202ENST00000334944 MSTNO14793 375 aa11.96□□□□□ -0.49
SF1-202ENST00000334944 SYNGR3O43761 229 aa11.96□□□□□ -0.49
SF1-202ENST00000334944 CD55P08174 381 aa11.96□□□□□ -0.49
SF1-202ENST00000334944 OTX1P32242 354 aaPredicted RBP11.96□□□□□ -0.49
SF1-202ENST00000334944 HERPUD1Q15011 391 aa11.96□□□□□ -0.49
SF1-202ENST00000334944 FNDC9Q8TBE3 224 aa11.96□□□□□ -0.49
SF1-202ENST00000334944 FOXB1Q99853 325 aa11.96□□□□□ -0.49
SF1-202ENST00000334944 R4GN57 208 aa11.96□□□□□ -0.49
SF1-202ENST00000334944 SPENQ96T58 3664 aaKnown RBP11.96□□□□□ -0.49
SF1-202ENST00000334944 C9orf172C9J069 976 aa11.96□□□□□ -0.5
SF1-202ENST00000334944 DEDDO75618 318 aa11.96□□□□□ -0.5
SF1-202ENST00000334944 SCGNO76038 276 aa11.96□□□□□ -0.5
SF1-202ENST00000334944 IGLV3-1P01715 115 aa11.96□□□□□ -0.5
SF1-202ENST00000334944 RAB4AP20338 218 aa11.96□□□□□ -0.5
SF1-202ENST00000334944 CTSSP25774 331 aa11.96□□□□□ -0.5
SF1-202ENST00000334944 LMO1P25800 156 aa11.96□□□□□ -0.5
SF1-202ENST00000334944 COL10A1Q03692 680 aa11.96□□□□□ -0.5
SF1-202ENST00000334944 ZNF92Q03936 586 aa11.96□□□□□ -0.5
SF1-202ENST00000334944 HIKESHIQ53FT3 197 aa11.96□□□□□ -0.5
SF1-202ENST00000334944 OR4X1Q8NH49 305 aa11.96□□□□□ -0.5
SF1-202ENST00000334944 GAPDHP04406 335 aaKnown RBP11.95□□□□□ -0.5
SF1-202ENST00000334944 SRP19P09132 144 aaKnown RBP11.95□□□□□ -0.5
SF1-202ENST00000334944 CRYGSP22914 178 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 RBMXP38159 391 aaKnown RBP11.95□□□□□ -0.5
SF1-202ENST00000334944 GLIPR1P48060 266 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 TSPO2Q5TGU0 170 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 SLC22A25Q6T423 547 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 FAM185AQ8N0U4 392 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 OR2V1Q8NHB1 315 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 PIGCQ92535 297 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 NIPSNAP3BQ9BS92 247 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 MEMO1Q9Y316 297 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 SCGB1D1O95968 90 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 RPS2P15880 293 aaKnown RBP11.95□□□□□ -0.5
SF1-202ENST00000334944 WNT5AP41221 380 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 UCP2P55851 309 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 PMS2P11Q13670 270 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 PEAR1Q5VY43 1037 aaPredicted RBP11.95□□□□□ -0.5
SF1-202ENST00000334944 VASH2Q86V25 355 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 MRPL41Q8IXM3 137 aaKnown RBP11.95□□□□□ -0.5
SF1-202ENST00000334944 TOMM40LQ969M1 308 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 CALHM2Q9HA72 323 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 PPIAL4AQ9Y536 164 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 WSB1Q9Y6I7 421 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 PRR14LQ5THK1 2151 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 BORCS7-ASMTA0A0B4J1R7 106 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 XKRY2A2RUG3 117 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 GJE1A6NN92 205 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 DVL1O14640 695 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 TGOLN2O43493 480 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 HIST1H3AP68431 136 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 COTL1Q14019 142 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 FAM89BQ8N5H3 189 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 COMMD1Q8N668 190 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 PP6455Q8WZ26 134 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 TVP23CQ96ET8 276 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 SPOCK3Q9BQ16 436 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 ZNF2Q9BSG1 426 aaPredicted RBP11.95□□□□□ -0.5
SF1-202ENST00000334944 OR51B6Q9H340 312 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 LIME1Q9H400 295 aa11.95□□□□□ -0.5
SF1-202ENST00000334944 PCNX2A6NKB5 2137 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 IGKV1-12A0A0C4DH73 117 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 IGKV1D-12P01611 117 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 SEC11BP0C7V7 166 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 ALDH3B1P43353 468 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 FXYD4P59646 89 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 BPIFB3P59826 476 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 RAB35Q15286 201 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 FOXL2NBQ6ZUU3 175 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 C1orf87Q8N0U7 546 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 OR2G3Q8NGZ4 309 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 R3HDM4Q96D70 268 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 PITPNC1Q9UKF7 332 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 DFFBO76075 338 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 HLA-HP01893 362 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 CYC1P08574 325 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 IRF2P14316 349 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 OR3A1P47881 315 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 ELLP55199 621 aaPredicted RBP11.94□□□□□ -0.5
SF1-202ENST00000334944 CD81P60033 236 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 VAX1Q5SQQ9 334 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 ATP1A1-AS1Q5TC04 95 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 FAM180AQ6UWF9 173 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 TMEM183AQ8IXX5 376 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 CPEB3Q8NE35 698 aaKnown RBP11.94□□□□□ -0.5
SF1-202ENST00000334944 TMEM37Q8WXS4 190 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 SYT3Q9BQG1 590 aa11.94□□□□□ -0.5
SF1-202ENST00000334944 MRPS18CQ9Y3D5 142 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms