RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 KISS1RQ969F8 398 aaPredicted RBP8.63□□□□□ -1.03
COL4A6-201ENST00000334504 PARLQ9H300 379 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 URB1O60287 2271 aaKnown RBP8.63□□□□□ -1.03
COL4A6-201ENST00000334504 PLPP3O14495 311 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 LEPROTL1O95214 131 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 AMY1AP04745 511 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 PSG2P11465 335 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 KIR2DL1P43626 348 aaPredicted RBP8.63□□□□□ -1.03
COL4A6-201ENST00000334504 KIR2DL2P43627 348 aaPredicted RBP8.63□□□□□ -1.03
COL4A6-201ENST00000334504 PABPC1L2AQ5JQF8 200 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 AMER3Q8N944 861 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 OR2I1PQ8NGU4 316 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 HIST1H2BAQ96A08 127 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 PPIL1Q9Y3C6 166 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 RGPD1P0DJD0 1748 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 H0YL77 283 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 NKX2-2O95096 273 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 NTN1O95631 604 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 ZNF793Q6ZN11 406 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 PTX4Q96A99 478 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 METTL1Q9UBP6 276 aaKnown RBP8.63□□□□□ -1.03
COL4A6-201ENST00000334504 IL19Q9UHD0 177 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 MMP17Q9ULZ9 603 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 A0A1B0GU03 582 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 SLC25A17O43808 307 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 CAPZBP47756 277 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 PPP2CBP62714 309 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 SLC23A3Q6PIS1 610 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 ASCL3Q9NQ33 180 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 LINC00587B1AMM8 73 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 PRSS23O95084 383 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 MT-ND6P03923 174 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 HSPB1P04792 205 aaKnown RBP8.62□□□□□ -1.03
COL4A6-201ENST00000334504 HMGA1P17096 107 aaKnown RBP8.62□□□□□ -1.03
COL4A6-201ENST00000334504 PMELP40967 661 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 RPL34P49207 117 aaKnown RBP8.62□□□□□ -1.03
COL4A6-201ENST00000334504 CDX2Q99626 313 aaPredicted RBP8.62□□□□□ -1.03
COL4A6-201ENST00000334504 CLN8Q9UBY8 286 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 DDX60Q8IY21 1712 aaKnown RBP8.62□□□□□ -1.03
COL4A6-201ENST00000334504 LDLRAD4O15165 306 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 IGLV3-25P01717 112 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 FOLR2P14207 255 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 ACER2Q5QJU3 275 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 SAMD13Q5VXD3 122 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 TMEM91Q6ZNR0 172 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 SLC36A1Q7Z2H8 476 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 FAM169BQ8N8A8 192 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 SARAFQ96BY9 339 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 LINC00615Q96LM1 132 aaPredicted RBP8.62□□□□□ -1.03
COL4A6-201ENST00000334504 ZBP1Q9H171 429 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 CDS2O95674 445 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 SMIM13P0DJ93 91 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 HTN1P15515 57 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 COX7A1P24310 79 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 PPP1CAP62136 330 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 ST6GALNAC3Q8NDV1 305 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 CLEC1BQ9P126 229 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 FFAR1O14842 300 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 EPHA8P29322 1005 aaPredicted RBP8.62□□□□□ -1.03
COL4A6-201ENST00000334504 PRRX1P54821 245 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 GFERP55789 205 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 KLF3P57682 345 aaPredicted RBP8.62□□□□□ -1.03
COL4A6-201ENST00000334504 TEPPQ6URK8 271 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 FGF14Q92915 247 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 PEF1Q9UBV8 284 aaKnown RBP8.62□□□□□ -1.03
COL4A6-201ENST00000334504 FER1L6Q2WGJ9 1857 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 PRRT4C9JH25 899 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 SMAD4Q13485 552 aaKnown RBP8.62□□□□□ -1.03
COL4A6-201ENST00000334504 FAM53BQ14153 422 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 ZNF124Q15973 351 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 WIPI1Q5MNZ9 446 aaPredicted RBP8.62□□□□□ -1.03
COL4A6-201ENST00000334504 IBA57Q5T440 356 aaKnown RBP8.62□□□□□ -1.03
COL4A6-201ENST00000334504 HDHD3Q9BSH5 251 aaPredicted RBP8.62□□□□□ -1.03
COL4A6-201ENST00000334504 TREM2Q9NZC2 230 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 CRYBG1Q9Y4K1 1723 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 TRAV8-7A0A075B6U6 113 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 A0A1W2PPC4 97 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 FCARP24071 287 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 MRPS11P82912 194 aaKnown RBP8.62□□□□□ -1.03
COL4A6-201ENST00000334504 SPANXN1Q5VSR9 72 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 ERASQ7Z444 233 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 ASB10Q8WXI3 467 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 LSM10Q969L4 123 aaKnown RBP8.62□□□□□ -1.03
COL4A6-201ENST00000334504 DPH3Q96FX2 82 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 MIEN1Q9BRT3 115 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 WIPI2Q9Y4P8 454 aa8.62□□□□□ -1.03
COL4A6-201ENST00000334504 hADV38S2A0JD32 116 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 C1QL1O75973 258 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 PATE4P0C8F1 98 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 PRF1P14222 555 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 SLC26A1Q9H2B4 701 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 GHITMQ9H3K2 345 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 THYN1Q9P016 225 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 A0A1W2PRD5 423 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 A0A1W2PRF3 423 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 A0A1W2PRM7 423 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 IGLV3-27P01718 113 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 HOXB1P14653 301 aaPredicted RBP8.61□□□□□ -1.03
COL4A6-201ENST00000334504 TNFRSF1AP19438 455 aa8.61□□□□□ -1.03
COL4A6-201ENST00000334504 OR10D3Q8NH80 312 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms