RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 HNF4GQ14541 408 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 PRAMEF20Q5VT98 475 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 NDUFAF3Q9BU61 184 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 FGF21Q9NSA1 209 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 OR14J1Q9UGF5 321 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 ZFHX2Q9C0A1 2572 aaPredicted RBP11.85□□□□□ -0.51
SYNE3-201ENST00000334258 IGKV1-27A0A075B6S5 117 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 B4E171 279 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 AMBPP02760 352 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 TK1P04183 234 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 TCN2P20062 427 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 MSX1P28360 303 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 TMEM267Q0VDI3 215 aaPredicted RBP11.84□□□□□ -0.51
SYNE3-201ENST00000334258 KCNMB1Q16558 191 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 DNLZQ5SXM8 178 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 ZNF66Q6ZN08 573 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 TMEM183AQ8IXX5 376 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 NEK7Q8TDX7 302 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 ATP5SQ99766 215 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 ZFHX4Q86UP3 3567 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 NPIPA2E9PIF3 369 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 NPIPA3F8WFD2 350 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 BCL2P10415 239 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 ENDOGQ14249 297 aaKnown RBP11.84□□□□□ -0.51
SYNE3-201ENST00000334258 FAM90A2PQ658T7 463 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 RPRMQ9NS64 109 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 CTSSP25774 331 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 UCP3P55916 312 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 ERVS71-1P61550 626 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 CFHR1Q03591 330 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 EIF3IQ13347 325 aaKnown RBP11.84□□□□□ -0.51
SYNE3-201ENST00000334258 RSPO1Q2MKA7 263 aaPredicted RBP11.84□□□□□ -0.51
SYNE3-201ENST00000334258 PHYHD1Q5SRE7 291 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 WDR5BQ86VZ2 330 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 SELENOHQ8IZQ5 122 aaKnown RBP11.84□□□□□ -0.51
SYNE3-201ENST00000334258 GAPTQ8N292 157 aa11.84□□□□□ -0.51
SYNE3-201ENST00000334258 HSPB6O14558 160 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 DVL1O14640 695 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 TCF21O43680 179 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 PDCD6O75340 191 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 DFFBO76075 338 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 NRASP01111 189 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 COL10A1Q03692 680 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 BAXQ07812 192 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 OR1P1Q8NH06 330 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 TMEM37Q8WXS4 190 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 PIGCQ92535 297 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 ZNF385AQ96PM9 386 aaKnown RBP11.83□□□□□ -0.52
SYNE3-201ENST00000334258 HIST1H2AAQ96QV6 131 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 ULBP2Q9BZM5 246 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 ADAMTS9Q9P2N4 1935 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 PPP5D1E7EU14 171 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 DHHO43323 396 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 MRPL41Q8IXM3 137 aaKnown RBP11.83□□□□□ -0.52
SYNE3-201ENST00000334258 NOL4LQ96MY1 436 aaPredicted RBP11.83□□□□□ -0.52
SYNE3-201ENST00000334258 SMIM7Q9BQ49 75 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 TCFL5Q9UL49 500 aa11.83□□□□□ -0.52
SYNE3-201ENST00000334258 DCHS1Q96JQ0 3298 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 IGKV1-12A0A0C4DH73 117 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 AQP7P3A6NL99 342 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 IGKV1D-12P01611 117 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 IGLV3-1P01715 115 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 CD55P08174 381 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 MMP7P09237 267 aaPredicted RBP11.82□□□□□ -0.52
SYNE3-201ENST00000334258 H1FOOQ8IZA3 346 aaPredicted RBP11.82□□□□□ -0.52
SYNE3-201ENST00000334258 OR5B12Q96R08 314 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 SDF2L1Q9HCN8 221 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 CUL9Q8IWT3 2517 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 PIAS2O75928 621 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 PATE4P0C8F1 98 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 VDAC1P21796 283 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 RND2P52198 227 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 IL24Q13007 206 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 SLC10A1Q14973 349 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 FAM185AQ8N0U4 392 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 SPEM1Q8N4L4 309 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 RNASE8Q8TDE3 154 aaKnown RBP11.82□□□□□ -0.52
SYNE3-201ENST00000334258 RAB24Q969Q5 203 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 CBLN4Q9NTU7 201 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 TRBV24-1A0A075B6N3 115 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 MKRN2OSH3BPM6 223 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 RAC2P15153 192 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 ELLP55199 621 aaPredicted RBP11.82□□□□□ -0.52
SYNE3-201ENST00000334258 NXPH1P58417 271 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 HIST3H3Q16695 136 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 IZUMO4Q1ZYL8 232 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 PLCXD3Q63HM9 321 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 NCR3LG1Q68D85 454 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 ZNF818PQ6ZRF7 136 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 OR5L2Q8NGL0 311 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 RPUSD4Q96CM3 377 aaKnown RBP11.82□□□□□ -0.52
SYNE3-201ENST00000334258 C10orf35Q96D05 121 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 PLK3Q9H4B4 646 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 WNT16Q9UBV4 365 aa11.82□□□□□ -0.52
SYNE3-201ENST00000334258 A0A1W2PPQ1 181 aa11.81□□□□□ -0.52
SYNE3-201ENST00000334258 IGLV3-19P01714 112 aa11.81□□□□□ -0.52
SYNE3-201ENST00000334258 LRP11Q86VZ4 500 aa11.81□□□□□ -0.52
SYNE3-201ENST00000334258 PLXDC1Q8IUK5 500 aa11.81□□□□□ -0.52
SYNE3-201ENST00000334258 ADPRHL1Q8NDY3 354 aa11.81□□□□□ -0.52
SYNE3-201ENST00000334258 R3HDM4Q96D70 268 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms