RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 TMEM50AO95807 157 aa16.09■□□□□ 0.17
RFTN1-201ENST00000334133 TSPAN15O95858 294 aa16.09■□□□□ 0.17
RFTN1-201ENST00000334133 CAMLGP49069 296 aa16.09■□□□□ 0.17
RFTN1-201ENST00000334133 UBE2NP61088 152 aaKnown RBP16.09■□□□□ 0.17
RFTN1-201ENST00000334133 TBC1D28Q2M2D7 210 aa16.09■□□□□ 0.17
RFTN1-201ENST00000334133 FAM53AQ6NSI3 398 aaPredicted RBP16.09■□□□□ 0.17
RFTN1-201ENST00000334133 OR2C3Q8N628 320 aa16.09■□□□□ 0.17
RFTN1-201ENST00000334133 ABHD14AQ9BUJ0 271 aa16.09■□□□□ 0.17
RFTN1-201ENST00000334133 PURGQ9UJV8 347 aaKnown RBP16.09■□□□□ 0.17
RFTN1-201ENST00000334133 MPC1Q9Y5U8 109 aa16.09■□□□□ 0.17
RFTN1-201ENST00000334133 ZFHX2Q9C0A1 2572 aaPredicted RBP16.09■□□□□ 0.17
RFTN1-201ENST00000334133 BORCS7-ASMTA0A0B4J1R7 106 aa16.08■□□□□ 0.17
RFTN1-201ENST00000334133 ZNF16P17020 682 aaPredicted RBP16.08■□□□□ 0.17
RFTN1-201ENST00000334133 P2RY1P47900 373 aa16.08■□□□□ 0.17
RFTN1-201ENST00000334133 F2RL1P55085 397 aa16.08■□□□□ 0.17
RFTN1-201ENST00000334133 PPP1CBP62140 327 aa16.08■□□□□ 0.17
RFTN1-201ENST00000334133 FAM76BQ5HYJ3 339 aa16.08■□□□□ 0.17
RFTN1-201ENST00000334133 TMEM178AQ8NBL3 297 aa16.08■□□□□ 0.17
RFTN1-201ENST00000334133 SCCPDHQ8NBX0 429 aa16.08■□□□□ 0.17
RFTN1-201ENST00000334133 OR10J5Q8NHC4 309 aa16.08■□□□□ 0.17
RFTN1-201ENST00000334133 PLPPR1Q8TBJ4 325 aa16.08■□□□□ 0.17
RFTN1-201ENST00000334133 SLC25A40Q8TBP6 338 aa16.08■□□□□ 0.17
RFTN1-201ENST00000334133 BOD1Q96IK1 185 aa16.08■□□□□ 0.17
RFTN1-201ENST00000334133 FAM212BQ9NTI7 297 aaPredicted RBP16.08■□□□□ 0.17
RFTN1-201ENST00000334133 PGLYRP1O75594 196 aaPredicted RBP16.08■□□□□ 0.16
RFTN1-201ENST00000334133 PMELP40967 661 aa16.08■□□□□ 0.16
RFTN1-201ENST00000334133 IL13RA2Q14627 380 aa16.08■□□□□ 0.16
RFTN1-201ENST00000334133 NANOS1Q8WY41 292 aaKnown RBP16.08■□□□□ 0.16
RFTN1-201ENST00000334133 PARP11Q9NR21 331 aa16.08■□□□□ 0.16
RFTN1-201ENST00000334133 PPP1R3CQ9UQK1 317 aa16.08■□□□□ 0.16
RFTN1-201ENST00000334133 INTS1Q8N201 2190 aaKnown RBP16.08■□□□□ 0.16
RFTN1-201ENST00000334133 TUSC2O75896 110 aa16.08■□□□□ 0.16
RFTN1-201ENST00000334133 ZNF826PQ6ZT77 177 aa16.08■□□□□ 0.16
RFTN1-201ENST00000334133 CDH20Q9HBT6 801 aa16.08■□□□□ 0.16
RFTN1-201ENST00000334133 CARHSP1Q9Y2V2 147 aaKnown RBP16.08■□□□□ 0.16
RFTN1-201ENST00000334133 RBM7Q9Y580 266 aaKnown RBP16.08■□□□□ 0.16
RFTN1-201ENST00000334133 HEATR1Q9H583 2144 aaKnown RBP16.07■□□□□ 0.16
RFTN1-201ENST00000334133 OR5B21A6NL26 309 aa16.07■□□□□ 0.16
RFTN1-201ENST00000334133 SMPD2O60906 423 aa16.07■□□□□ 0.16
RFTN1-201ENST00000334133 ZNF14P17017 642 aaPredicted RBP16.07■□□□□ 0.16
RFTN1-201ENST00000334133 CMTM1Q8IZ96 169 aa16.07■□□□□ 0.16
RFTN1-201ENST00000334133 OR1J1Q8NGS3 322 aa16.07■□□□□ 0.16
RFTN1-201ENST00000334133 FAM213BQ8TBF2 198 aa16.07■□□□□ 0.16
RFTN1-201ENST00000334133 TMEM171Q8WVE6 324 aa16.07■□□□□ 0.16
RFTN1-201ENST00000334133 SEC11CQ9BY50 192 aa16.07■□□□□ 0.16
RFTN1-201ENST00000334133 ZDHHC11Q9H8X9 412 aa16.07■□□□□ 0.16
RFTN1-201ENST00000334133 GP6Q9HCN6 339 aa16.07■□□□□ 0.16
RFTN1-201ENST00000334133 TINAGQ9UJW2 476 aa16.07■□□□□ 0.16
RFTN1-201ENST00000334133 HSPA12AO43301 675 aa16.07■□□□□ 0.16
RFTN1-201ENST00000334133 CDS2O95674 445 aa16.07■□□□□ 0.16
RFTN1-201ENST00000334133 PSG2P11465 335 aa16.07■□□□□ 0.16
RFTN1-201ENST00000334133 C20orf24Q9BUV8 137 aa16.07■□□□□ 0.16
RFTN1-201ENST00000334133 EIF5A2Q9GZV4 153 aaKnown RBP16.07■□□□□ 0.16
RFTN1-201ENST00000334133 CDRT15L2A8MXV6 281 aa16.06■□□□□ 0.16
RFTN1-201ENST00000334133 OR2H2O95918 312 aa16.06■□□□□ 0.16
RFTN1-201ENST00000334133 MPV17P39210 176 aa16.06■□□□□ 0.16
RFTN1-201ENST00000334133 IL24Q13007 206 aa16.06■□□□□ 0.16
RFTN1-201ENST00000334133 ZNF154Q13106 437 aa16.06■□□□□ 0.16
RFTN1-201ENST00000334133 GPR157Q5UAW9 335 aa16.06■□□□□ 0.16
RFTN1-201ENST00000334133 VWA1Q6PCB0 445 aa16.06■□□□□ 0.16
RFTN1-201ENST00000334133 TMEM56Q96MV1 263 aa16.06■□□□□ 0.16
RFTN1-201ENST00000334133 GLRX2Q9NS18 164 aa16.06■□□□□ 0.16
RFTN1-201ENST00000334133 TRAPPC2LQ9UL33 140 aa16.06■□□□□ 0.16
RFTN1-201ENST00000334133 TMEM56-RWDD3S4R434 201 aa16.06■□□□□ 0.16
RFTN1-201ENST00000334133 PVALBP20472 110 aaPredicted RBP16.06■□□□□ 0.16
RFTN1-201ENST00000334133 VAMP2P63027 116 aa16.06■□□□□ 0.16
RFTN1-201ENST00000334133 C10orf91Q5T1B1 145 aa16.06■□□□□ 0.16
RFTN1-201ENST00000334133 SPAG16Q8N0X2 631 aa16.06■□□□□ 0.16
RFTN1-201ENST00000334133 J3QT63 122 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 WNT9BO14905 357 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 GPR37O15354 613 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 CHST1O43916 411 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 NXPH2O95156 264 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 SPP1P10451 314 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 PPP1CCP36873 323 aaKnown RBP16.05■□□□□ 0.16
RFTN1-201ENST00000334133 RUNX1Q01196 453 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 PSG7Q13046 419 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 ZNF324BQ6AW86 544 aaPredicted RBP16.05■□□□□ 0.16
RFTN1-201ENST00000334133 Q6P435 159 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 Q6ZS49 121 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 FAM185AQ8N0U4 392 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 OR5C1Q8NGR4 320 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 KCNS2Q9ULS6 477 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 FBXO7Q9Y3I1 522 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 OR2W1Q9Y3N9 320 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 AKAP13Q12802 2813 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 SMG1Q96Q15 3661 aaKnown RBP16.05■□□□□ 0.16
RFTN1-201ENST00000334133 SNAPINO95295 136 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 CD5P06127 495 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 DANCRP0C864 163 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 HLA-DRB3P79483 266 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 RNASE11Q8TAA1 199 aaKnown RBP16.05■□□□□ 0.16
RFTN1-201ENST00000334133 BCL2L14Q9BZR8 327 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 PARD6AQ9NPB6 346 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 CACFD1Q9UGQ2 172 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 PRELID1Q9Y255 219 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 ZNF175Q9Y473 711 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 DCHS1Q96JQ0 3298 aa16.05■□□□□ 0.16
RFTN1-201ENST00000334133 CNOT4O95628 575 aaKnown RBP16.05■□□□□ 0.16
RFTN1-201ENST00000334133 TMEM252Q8N6L7 170 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms