RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TMEM267Q0VDI3 215 aaPredicted RBP10.53□□□□□ -0.72
VPS33B-201ENST00000333371 ZNF266Q14584 549 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 NMSQ5H8A3 153 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 ACER2Q5QJU3 275 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 TMEM164Q5U3C3 297 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 KCNE4Q8WWG9 221 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 CPNE4Q96A23 557 aaPredicted RBP10.53□□□□□ -0.72
VPS33B-201ENST00000333371 DDA1Q9BW61 102 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 TAAR3PQ9P1P4 343 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 METTL1Q9UBP6 276 aaKnown RBP10.53□□□□□ -0.72
VPS33B-201ENST00000333371 NOSIPQ9Y314 301 aaKnown RBP10.53□□□□□ -0.72
VPS33B-201ENST00000333371 TRAV20A0A0B4J274 112 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 CXCL1P09341 107 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 PAX9P55771 341 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 VASH2Q86V25 355 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 SPSB4Q96A44 273 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 YPEL4Q96NS1 127 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 PLSCR2Q9NRY7 297 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 MIOXQ9UGB7 285 aa10.53□□□□□ -0.72
VPS33B-201ENST00000333371 IGHV3-64DA0A0J9YX35 117 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 DNPH1O43598 174 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 CYTIPO60759 359 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 MRPL33O75394 65 aaKnown RBP10.52□□□□□ -0.73
VPS33B-201ENST00000333371 SERPINA7P05543 415 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 SRP19P09132 144 aaKnown RBP10.52□□□□□ -0.73
VPS33B-201ENST00000333371 TAGLN2P37802 199 aaKnown RBP10.52□□□□□ -0.73
VPS33B-201ENST00000333371 CYB561P49447 251 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 ICAM4Q14773 271 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 TUSC5Q8IXB3 177 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 IL22RA1Q8N6P7 574 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 LOXL4Q96JB6 756 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 TNRC6AQ8NDV7 1962 aaKnown RBP10.52□□□□□ -0.73
VPS33B-201ENST00000333371 WRBO00258 174 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 S100A8P05109 93 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 S100A12P80511 92 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 C3AR1Q16581 482 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 RIPPLY2Q5TAB7 128 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 HEPN1Q6WQI6 88 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 ZNF295-AS1Q8N0V1 137 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 PRR18Q8N4B5 295 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 IL1F10Q8WWZ1 152 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 MUCL1Q96DR8 90 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 ZNF251Q9BRH9 671 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 REPIN1Q9BWE0 567 aaKnown RBP10.52□□□□□ -0.73
VPS33B-201ENST00000333371 FAM86C1Q9NVL1 165 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 ZNF391Q9UJN7 358 aa10.52□□□□□ -0.73
VPS33B-201ENST00000333371 C9orf172C9J069 976 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 AP4M1O00189 453 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 GFRA1P56159 465 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 ERVFRD-1P60508 538 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 FGF12P61328 243 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 DLK1P80370 383 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 ID3Q02535 119 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 HNF4GQ14541 408 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 HIKESHIQ53FT3 197 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 CDPF1Q6NVV7 123 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 Q6ZRM9 215 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 MRPL21Q7Z2W9 205 aaKnown RBP10.51□□□□□ -0.73
VPS33B-201ENST00000333371 LFNGQ8NES3 379 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 Q8WTZ3 238 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 THOC3Q96J01 351 aaKnown RBP10.51□□□□□ -0.73
VPS33B-201ENST00000333371 PRDM14Q9GZV8 571 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 FOXJ2Q9P0K8 574 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 PPIHO43447 177 aaKnown RBP10.51□□□□□ -0.73
VPS33B-201ENST00000333371 PGLYRP1O75594 196 aaPredicted RBP10.51□□□□□ -0.73
VPS33B-201ENST00000333371 SCAF4O95104 1147 aaKnown RBP10.51□□□□□ -0.73
VPS33B-201ENST00000333371 PSG2P11465 335 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 CD59P13987 128 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 UCP1P25874 307 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 UBE2KP61086 200 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 FOXO1Q12778 655 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 PCSK4Q6UW60 755 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 FAM180AQ6UWF9 173 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 COLCA1Q6ZS62 124 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 ZNF429Q86V71 674 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 THNSL2Q86YJ6 484 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 ZDHHC23Q8IYP9 409 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 KDF1Q8NAX2 398 aaPredicted RBP10.51□□□□□ -0.73
VPS33B-201ENST00000333371 EDARADDQ8WWZ3 215 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 RSG1Q9BU20 258 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 VSIRQ9H7M9 311 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 RYDENQ9NUL5 291 aaKnown RBP10.51□□□□□ -0.73
VPS33B-201ENST00000333371 RNF115Q9Y4L5 304 aa10.51□□□□□ -0.73
VPS33B-201ENST00000333371 TGIF2-C20orf24A0A0A6YYL0 155 aa10.5□□□□□ -0.73
VPS33B-201ENST00000333371 FAM166BA8MTA8 275 aa10.5□□□□□ -0.73
VPS33B-201ENST00000333371 TRAPPC2LH3BP13 241 aa10.5□□□□□ -0.73
VPS33B-201ENST00000333371 TUSC2O75896 110 aa10.5□□□□□ -0.73
VPS33B-201ENST00000333371 HOXB1P14653 301 aaPredicted RBP10.5□□□□□ -0.73
VPS33B-201ENST00000333371 VDAC1P21796 283 aa10.5□□□□□ -0.73
VPS33B-201ENST00000333371 SRPXP78539 464 aa10.5□□□□□ -0.73
VPS33B-201ENST00000333371 TLE1Q04724 770 aa10.5□□□□□ -0.73
VPS33B-201ENST00000333371 KIAA0141Q14154 515 aaPredicted RBP10.5□□□□□ -0.73
VPS33B-201ENST00000333371 SPIN2AQ99865 258 aa10.5□□□□□ -0.73
VPS33B-201ENST00000333371 SPIN2BQ9BPZ2 258 aa10.5□□□□□ -0.73
VPS33B-201ENST00000333371 SLC25A31Q9H0C2 315 aa10.5□□□□□ -0.73
VPS33B-201ENST00000333371 CFAP47Q6ZTR5 3102 aa10.5□□□□□ -0.73
VPS33B-201ENST00000333371 IFITM10A6NMD0 228 aa10.5□□□□□ -0.73
VPS33B-201ENST00000333371 HSPA12AO43301 675 aa10.5□□□□□ -0.73
VPS33B-201ENST00000333371 RHBDL1O75783 438 aa10.5□□□□□ -0.73
VPS33B-201ENST00000333371 SLC34A2O95436 690 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms