RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 GLAP06280 429 aa19.47■□□□□ 0.71
TSEN54-201ENST00000333213 NMBP08949 121 aa19.47■□□□□ 0.71
TSEN54-201ENST00000333213 RPA2P15927 270 aa19.47■□□□□ 0.71
TSEN54-201ENST00000333213 DTYMKP23919 212 aa19.47■□□□□ 0.71
TSEN54-201ENST00000333213 PRDX2P32119 198 aa19.47■□□□□ 0.71
TSEN54-201ENST00000333213 PPOXP50336 477 aa19.47■□□□□ 0.71
TSEN54-201ENST00000333213 COL10A1Q03692 680 aa19.47■□□□□ 0.71
TSEN54-201ENST00000333213 C17orf107Q6ZR85 190 aa19.47■□□□□ 0.71
TSEN54-201ENST00000333213 OVCH2Q7RTZ1 564 aa19.47■□□□□ 0.71
TSEN54-201ENST00000333213 C5orf24Q7Z6I8 188 aa19.47■□□□□ 0.71
TSEN54-201ENST00000333213 FAM90A1Q86YD7 464 aa19.47■□□□□ 0.71
TSEN54-201ENST00000333213 OR51S1Q8NGJ8 323 aa19.47■□□□□ 0.71
TSEN54-201ENST00000333213 CCL17Q92583 94 aa19.47■□□□□ 0.71
TSEN54-201ENST00000333213 SLC6A7Q99884 636 aa19.47■□□□□ 0.71
TSEN54-201ENST00000333213 DNAJB11Q9UBS4 358 aa19.47■□□□□ 0.71
TSEN54-201ENST00000333213 TENM4Q6N022 2769 aa19.46■□□□□ 0.71
TSEN54-201ENST00000333213 TMEM82A0PJX8 343 aa19.46■□□□□ 0.71
TSEN54-201ENST00000333213 H2BFSP57053 126 aa19.46■□□□□ 0.71
TSEN54-201ENST00000333213 SLC51BQ86UW2 128 aa19.46■□□□□ 0.71
TSEN54-201ENST00000333213 OR52B4Q8NGK2 314 aa19.46■□□□□ 0.71
TSEN54-201ENST00000333213 OR11L1Q8NGX0 322 aa19.46■□□□□ 0.71
TSEN54-201ENST00000333213 MRPL30Q8TCC3 161 aaKnown RBP19.46■□□□□ 0.71
TSEN54-201ENST00000333213 SPOCK3Q9BQ16 436 aa19.46■□□□□ 0.71
TSEN54-201ENST00000333213 SHARPINQ9H0F6 387 aa19.46■□□□□ 0.71
TSEN54-201ENST00000333213 LAMP3Q9UQV4 416 aa19.46■□□□□ 0.71
TSEN54-201ENST00000333213 DSCAMO60469 2012 aa19.45■□□□□ 0.7
TSEN54-201ENST00000333213 CLEC18AA5D8T8 446 aa19.45■□□□□ 0.7
TSEN54-201ENST00000333213 IFNL4K9M1U5 179 aa19.45■□□□□ 0.7
TSEN54-201ENST00000333213 RLN1P04808 185 aa19.45■□□□□ 0.7
TSEN54-201ENST00000333213 CSN2P05814 226 aa19.45■□□□□ 0.7
TSEN54-201ENST00000333213 RBM39Q14498 530 aaKnown RBP19.45■□□□□ 0.7
TSEN54-201ENST00000333213 CLEC18BQ6UXF7 455 aa19.45■□□□□ 0.7
TSEN54-201ENST00000333213 MUC20Q8N307 709 aaPredicted RBP19.45■□□□□ 0.7
TSEN54-201ENST00000333213 EIF4E3Q8N5X7 224 aaKnown RBP19.45■□□□□ 0.7
TSEN54-201ENST00000333213 CLEC18CQ8NCF0 446 aa19.45■□□□□ 0.7
TSEN54-201ENST00000333213 UBTD1Q9HAC8 227 aa19.45■□□□□ 0.7
TSEN54-201ENST00000333213 TMEM106BQ9NUM4 274 aa19.45■□□□□ 0.7
TSEN54-201ENST00000333213 PFDN2Q9UHV9 154 aa19.45■□□□□ 0.7
TSEN54-201ENST00000333213 GLS2Q9UI32 602 aa19.45■□□□□ 0.7
TSEN54-201ENST00000333213 TMEM178BH3BS89 294 aa19.45■□□□□ 0.7
TSEN54-201ENST00000333213 ZNF737O75373 536 aa19.45■□□□□ 0.7
TSEN54-201ENST00000333213 ATXN7L3Q14CW9 347 aaPredicted RBP19.45■□□□□ 0.7
TSEN54-201ENST00000333213 RNASE10Q5GAN6 216 aaKnown RBP19.45■□□□□ 0.7
TSEN54-201ENST00000333213 SHEQ5VZ18 495 aa19.45■□□□□ 0.7
TSEN54-201ENST00000333213 DEFB108BQ8NET1 73 aa19.45■□□□□ 0.7
TSEN54-201ENST00000333213 AMY2AP04746 511 aa19.44■□□□□ 0.7
TSEN54-201ENST00000333213 IRF2P14316 349 aa19.44■□□□□ 0.7
TSEN54-201ENST00000333213 PLA2G2AP14555 144 aa19.44■□□□□ 0.7
TSEN54-201ENST00000333213 SRSF4Q08170 494 aaKnown RBP19.44■□□□□ 0.7
TSEN54-201ENST00000333213 TEX36Q5VZQ5 186 aa19.44■□□□□ 0.7
TSEN54-201ENST00000333213 GSG1LQ6UXU4 331 aa19.44■□□□□ 0.7
TSEN54-201ENST00000333213 HSD17B13Q7Z5P4 300 aaPredicted RBP19.44■□□□□ 0.7
TSEN54-201ENST00000333213 ANXA10Q9UJ72 324 aa19.44■□□□□ 0.7
TSEN54-201ENST00000333213 TANC2Q9HCD6 1990 aa19.44■□□□□ 0.7
TSEN54-201ENST00000333213 IGHV1-69-2A0A0G2JMI3 117 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 A8MXK9 166 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 LYNX1G3V0Z9 82 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 GOSR2O14653 212 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 ARPC5O15511 151 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 LYNX1P0DP58 116 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 OR3A1P47881 315 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 STUMQ69YW2 141 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 LPCAT3Q6P1A2 487 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 GAPTQ8N292 157 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 OR5AP2Q8NGF4 316 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 MRGPRFQ96AM1 343 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 SEBOXQ9HB31 216 aaPredicted RBP19.43■□□□□ 0.7
TSEN54-201ENST00000333213 Q9N2K0 584 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 EDARQ9UNE0 448 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 A0A1B0GW55 424 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 A1L4Q6 167 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 OOEPA6NGQ2 149 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 DUX4L2P0CJ85 424 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 DUX4L3P0CJ86 424 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 DUX4L4P0CJ87 422 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 DUX4L5P0CJ88 424 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 DUX4L6P0CJ89 424 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 DUX4L7P0CJ90 424 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 COL8A2P25067 703 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 GABRA2P47869 451 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 DUX4L9Q6RFH8 374 aaPredicted RBP19.43■□□□□ 0.7
TSEN54-201ENST00000333213 ZNF497Q6ZNH5 498 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 PCNPQ8WW12 178 aaKnown RBP19.43■□□□□ 0.7
TSEN54-201ENST00000333213 ARL6Q9H0F7 186 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 CHMP1AQ9HD42 196 aaPredicted RBP19.43■□□□□ 0.7
TSEN54-201ENST00000333213 DUX4Q9UBX2 424 aa19.43■□□□□ 0.7
TSEN54-201ENST00000333213 TACC2O95359 2948 aa19.42■□□□□ 0.7
TSEN54-201ENST00000333213 LRRC30A6NM36 301 aa19.42■□□□□ 0.7
TSEN54-201ENST00000333213 SDCBPO00560 298 aaPredicted RBP19.42■□□□□ 0.7
TSEN54-201ENST00000333213 LY6HO94772 140 aa19.42■□□□□ 0.7
TSEN54-201ENST00000333213 RCC1P18754 421 aaPredicted RBP19.42■□□□□ 0.7
TSEN54-201ENST00000333213 TBPP20226 339 aa19.42■□□□□ 0.7
TSEN54-201ENST00000333213 NUP62P37198 522 aaPredicted RBP19.42■□□□□ 0.7
TSEN54-201ENST00000333213 FGL1Q08830 312 aa19.42■□□□□ 0.7
TSEN54-201ENST00000333213 VAX1Q5SQQ9 334 aa19.42■□□□□ 0.7
TSEN54-201ENST00000333213 ZNRF1Q8ND25 227 aa19.42■□□□□ 0.7
TSEN54-201ENST00000333213 COQ2Q96H96 371 aa19.42■□□□□ 0.7
TSEN54-201ENST00000333213 TRAV39A0A0B4J263 110 aa19.41■□□□□ 0.7
TSEN54-201ENST00000333213 SCO1O75880 301 aa19.41■□□□□ 0.7
TSEN54-201ENST00000333213 SELLP14151 372 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms