RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 LY86O95711 162 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 BPNT1O95861 308 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 NQO2P16083 231 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 FDX2Q6P4F2 183 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 BIVMQ86UB2 503 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 MARCH1Q8TCQ1 289 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 RGCCQ9H4X1 137 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 METTL8Q9H825 291 aaKnown RBP13.55□□□□□ -0.24
PDGFB-201ENST00000331163 ACANP16112 2415 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 OR2F2O95006 317 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 TNFSF4P23510 183 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 FABP9Q0Z7S8 132 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 OR2F1Q13607 317 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 FAM58AQ8N1B3 248 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 WDR31Q8NA23 367 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 LPAR5Q9H1C0 372 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 BARX1Q9HBU1 254 aaPredicted RBP13.55□□□□□ -0.24
PDGFB-201ENST00000331163 KCNK7Q9Y2U2 307 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 MBD3L4A6NDZ8 208 aaPredicted RBP13.55□□□□□ -0.24
PDGFB-201ENST00000331163 MBD3L3A6NE82 208 aaPredicted RBP13.55□□□□□ -0.24
PDGFB-201ENST00000331163 MBD3L5A6NJ08 208 aaPredicted RBP13.55□□□□□ -0.24
PDGFB-201ENST00000331163 CD40P25942 277 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 PEG10Q86TG7 708 aaKnown RBP13.55□□□□□ -0.24
PDGFB-201ENST00000331163 OR5M8Q8NGP6 311 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 MBD3L2Q8NHZ7 208 aaPredicted RBP13.55□□□□□ -0.24
PDGFB-201ENST00000331163 GSN-AS1Q9NRJ2 163 aa13.55□□□□□ -0.24
PDGFB-201ENST00000331163 CISD1Q9NZ45 108 aaKnown RBP13.55□□□□□ -0.24
PDGFB-201ENST00000331163 CD3EP07766 207 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 SERPINF1P36955 418 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 ZNF154Q13106 437 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 TMEM211Q6ICI0 200 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 ZNF565Q8N9K5 539 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 CLCC1Q96S66 551 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 REPIN1Q9BWE0 567 aaKnown RBP13.54□□□□□ -0.24
PDGFB-201ENST00000331163 GHRLQ9UBU3 117 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 PPP1R3CQ9UQK1 317 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 MYO9AB2RTY4 2548 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 NOTCH3Q9UM47 2321 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 RAB27BO00194 218 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 MED6O75586 246 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 CYB5R3P00387 301 aaPredicted RBP13.54□□□□□ -0.24
PDGFB-201ENST00000331163 HOXB5P09067 269 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 TPT1P13693 172 aaKnown RBP13.54□□□□□ -0.24
PDGFB-201ENST00000331163 HIST1H1DP16402 221 aaKnown RBP13.54□□□□□ -0.24
PDGFB-201ENST00000331163 UQCC1Q9NVA1 299 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 CPAMD8Q8IZJ3 1885 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.54□□□□□ -0.24
PDGFB-201ENST00000331163 TACC2O95359 2948 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 ADAD2Q8NCV1 583 aaKnown RBP13.54□□□□□ -0.24
PDGFB-201ENST00000331163 OR10V1Q8NGI7 309 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 AKR1E2Q96JD6 320 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 PHB2Q99623 299 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 C1QTNF5Q9BXJ0 243 aa13.54□□□□□ -0.24
PDGFB-201ENST00000331163 IGKV1-12A0A0C4DH73 117 aa13.53□□□□□ -0.24
PDGFB-201ENST00000331163 SRSF10O75494 262 aaKnown RBP13.53□□□□□ -0.24
PDGFB-201ENST00000331163 IGKV1D-12P01611 117 aa13.53□□□□□ -0.24
PDGFB-201ENST00000331163 SP6Q3SY56 376 aa13.53□□□□□ -0.24
PDGFB-201ENST00000331163 ZNF808Q8N4W9 903 aaPredicted RBP13.53□□□□□ -0.24
PDGFB-201ENST00000331163 SCCPDHQ8NBX0 429 aa13.53□□□□□ -0.24
PDGFB-201ENST00000331163 SULT4A1Q9BR01 284 aa13.53□□□□□ -0.24
PDGFB-201ENST00000331163 ADAP1O75689 374 aa13.53□□□□□ -0.24
PDGFB-201ENST00000331163 RAB6AP20340 208 aa13.53□□□□□ -0.24
PDGFB-201ENST00000331163 IL2RGP31785 369 aa13.53□□□□□ -0.24
PDGFB-201ENST00000331163 TIMM23BQ5SRD1 257 aa13.53□□□□□ -0.24
PDGFB-201ENST00000331163 BAP18Q8IXM2 172 aa13.53□□□□□ -0.24
PDGFB-201ENST00000331163 RHOFQ9HBH0 211 aa13.53□□□□□ -0.24
PDGFB-201ENST00000331163 LPAR2Q9HBW0 351 aa13.53□□□□□ -0.24
PDGFB-201ENST00000331163 VSIG4Q9Y279 399 aa13.53□□□□□ -0.24
PDGFB-201ENST00000331163 MTORP42345 2549 aa13.53□□□□□ -0.24
PDGFB-201ENST00000331163 NAV3Q8IVL0 2385 aa13.53□□□□□ -0.24
PDGFB-201ENST00000331163 HELZ2Q9BYK8 2649 aaKnown RBP13.52□□□□□ -0.24
PDGFB-201ENST00000331163 A0A1W2PRD5 423 aa13.52□□□□□ -0.24
PDGFB-201ENST00000331163 A0A1W2PRF3 423 aa13.52□□□□□ -0.24
PDGFB-201ENST00000331163 A0A1W2PRM7 423 aa13.52□□□□□ -0.24
PDGFB-201ENST00000331163 TMPRSS2O15393 492 aa13.52□□□□□ -0.24
PDGFB-201ENST00000331163 SNAPC5O75971 98 aa13.52□□□□□ -0.24
PDGFB-201ENST00000331163 RCC1P18754 421 aaPredicted RBP13.52□□□□□ -0.24
PDGFB-201ENST00000331163 AESQ08117 197 aa13.52□□□□□ -0.24
PDGFB-201ENST00000331163 NCMAPQ5T1S8 102 aa13.52□□□□□ -0.24
PDGFB-201ENST00000331163 ZNF2Q9BSG1 426 aaPredicted RBP13.52□□□□□ -0.24
PDGFB-201ENST00000331163 AK3Q9UIJ7 227 aa13.52□□□□□ -0.24
PDGFB-201ENST00000331163 hCG_1809904A0A1W2PP81 198 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 A0A1W2PPE3 182 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 A0A1W2PR64 198 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 A0A1W2PRV1 198 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 MUC1P15941 1255 aaPredicted RBP13.52□□□□□ -0.25
PDGFB-201ENST00000331163 OR5AP2Q8NGF4 316 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 OR51H1Q8NH63 302 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 RNF141Q8WVD5 230 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 HPSE2Q8WWQ2 592 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 NINJ1Q92982 152 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 DCAF16Q9NXF7 216 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 MTCH1Q9NZJ7 389 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 AMDHD2Q9Y303 409 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 SFTA3P0C7M3 94 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 PLA2G5P39877 138 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 F2RL1P55085 397 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 CEACAM21Q3KPI0 293 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 PLAC9Q5JTB6 97 aa13.52□□□□□ -0.25
PDGFB-201ENST00000331163 CLEC9AQ6UXN8 241 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms