RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 HIKESHIQ53FT3 197 aa11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 PPP1R32Q7Z5V6 425 aa11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 CXorf67Q86X51 503 aaPredicted RBP11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 SELENOHQ8IZQ5 122 aaKnown RBP11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 DEGS1O15121 323 aa11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 HEXAP06865 529 aa11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 SELEP16581 610 aa11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 DLK1P80370 383 aa11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 TLE4Q04727 773 aa11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 TESK1Q15569 626 aa11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 C6orf15Q6UXA7 325 aaPredicted RBP11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 ZNF808Q8N4W9 903 aaPredicted RBP11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 PLPPR2Q96GM1 343 aa11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 DEFB127Q9H1M4 99 aa11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 MTCH1Q9NZJ7 389 aa11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 ARGFXA6NJG6 315 aa11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 CEBPZOSA8MTT3 80 aa11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 S100A8P05109 93 aa11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 Q0VFX4 171 aa11.06□□□□□ -0.64
HMGCS1-201ENST00000325110 LRRC3CA6NJW4 275 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 ZXDAP98168 799 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 CLN3Q13286 438 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 NECAP1Q8NC96 275 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 TTC28Q96AY4 2481 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 PQLC2LA1A4F0 135 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 CER1O95813 267 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 CLDN1O95832 211 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 RPS23P62266 143 aaKnown RBP11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 APOBEC3DQ96AK3 386 aaPredicted RBP11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 CLDN23Q96B33 292 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 S100PBPQ96BU1 408 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 OR1A1Q9P1Q5 309 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 ABI3Q9P2A4 366 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 ZNF391Q9UJN7 358 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 CADP27708 2225 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 MED13Q9UHV7 2174 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 CACNA1HO95180 2353 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 IDH3GP51553 393 aaPredicted RBP11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 B3GALT5-AS1P59052 145 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 Q6ZPA2 131 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 OR4D5Q8NGN0 318 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 GNPNAT1Q96EK6 184 aaPredicted RBP11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 Q9N2K0 584 aa11.05□□□□□ -0.64
HMGCS1-201ENST00000325110 PROB1E7EW31 1015 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 K7N7A8 449 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 AP4M1O00189 453 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 LILRA1O75019 489 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 NKX6-1P78426 367 aaPredicted RBP11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 ZNF787Q6DD87 383 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 FAM185AQ8N0U4 392 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 HPSE2Q8WWQ2 592 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 SIGLEC12Q96PQ1 595 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 ZNF665Q9H7R5 613 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 RHBDL1O75783 438 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 NXPH2O95156 264 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 TMEM50AO95807 157 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 FGF12P61328 243 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 OR8B8Q15620 311 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 FOXL2NBQ6ZUU3 175 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 FAM58AQ8N1B3 248 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 RBMXL1Q96E39 390 aaKnown RBP11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 LYRM2Q9NU23 88 aaPredicted RBP11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 USF3Q68DE3 2245 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 CEP192Q8TEP8 1941 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 BMP5P22003 454 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 S100PP25815 95 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 SPINK9Q5DT21 86 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 C9orf152Q5JTZ5 239 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 TIPARPQ7Z3E1 657 aaKnown RBP11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 PSENENQ9NZ42 101 aa11.04□□□□□ -0.64
HMGCS1-201ENST00000325110 COL4A2P08572 1712 aa11.03□□□□□ -0.64
HMGCS1-201ENST00000325110 ARHGAP21Q5T5U3 1957 aa11.03□□□□□ -0.64
HMGCS1-201ENST00000325110 PITX3O75364 302 aa11.03□□□□□ -0.64
HMGCS1-201ENST00000325110 PGLYRP1O75594 196 aaPredicted RBP11.03□□□□□ -0.64
HMGCS1-201ENST00000325110 KRASP01116 189 aa11.03□□□□□ -0.64
HMGCS1-201ENST00000325110 EIF3IQ13347 325 aaKnown RBP11.03□□□□□ -0.64
HMGCS1-201ENST00000325110 HERPUD1Q15011 391 aa11.03□□□□□ -0.64
HMGCS1-201ENST00000325110 OR1C1Q15619 314 aa11.03□□□□□ -0.64
HMGCS1-201ENST00000325110 GCNT2Q8N0V5 402 aa11.03□□□□□ -0.64
HMGCS1-201ENST00000325110 TMEM105Q8N8V8 129 aa11.03□□□□□ -0.64
HMGCS1-201ENST00000325110 TGIF2-C20orf24A0A0A6YYL0 155 aa11.03□□□□□ -0.64
HMGCS1-201ENST00000325110 UBE2L5PA0A1B0GUS4 154 aa11.03□□□□□ -0.64
HMGCS1-201ENST00000325110 EIF2S3P41091 472 aaKnown RBP11.03□□□□□ -0.64
HMGCS1-201ENST00000325110 ADIRFQ15847 76 aa11.03□□□□□ -0.64
HMGCS1-201ENST00000325110 GPR146Q96CH1 333 aa11.03□□□□□ -0.64
HMGCS1-201ENST00000325110 TCEAL7Q9BRU2 100 aa11.03□□□□□ -0.64
HMGCS1-201ENST00000325110 UFSP2Q9NUQ7 469 aa11.03□□□□□ -0.64
HMGCS1-201ENST00000325110 A0A0G2JRQ6 117 aa11.02□□□□□ -0.64
HMGCS1-201ENST00000325110 C5orf52A6NGY3 159 aa11.02□□□□□ -0.64
HMGCS1-201ENST00000325110 DNPH1O43598 174 aa11.02□□□□□ -0.64
HMGCS1-201ENST00000325110 CLN5O75503 358 aa11.02□□□□□ -0.64
HMGCS1-201ENST00000325110 SERPINA7P05543 415 aa11.02□□□□□ -0.64
HMGCS1-201ENST00000325110 F2RP25116 425 aa11.02□□□□□ -0.64
HMGCS1-201ENST00000325110 UCP3P55916 312 aa11.02□□□□□ -0.64
HMGCS1-201ENST00000325110 TMEM164Q5U3C3 297 aa11.02□□□□□ -0.64
HMGCS1-201ENST00000325110 TMEM42Q69YG0 159 aa11.02□□□□□ -0.64
HMGCS1-201ENST00000325110 RPUSD4Q96CM3 377 aaKnown RBP11.02□□□□□ -0.64
HMGCS1-201ENST00000325110 PFDN5Q99471 154 aa11.02□□□□□ -0.64
HMGCS1-201ENST00000325110 ZNF251Q9BRH9 671 aa11.02□□□□□ -0.64
HMGCS1-201ENST00000325110 STRADBQ9C0K7 418 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms