RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 PCNX2A6NKB5 2137 aa14.85□□□□□ -0.03
COL9A1-201ENST00000320755 A6NLC8 198 aa14.85□□□□□ -0.03
COL9A1-201ENST00000320755 SIRPB1O00241 398 aa14.85□□□□□ -0.03
COL9A1-201ENST00000320755 PGLYRP1O75594 196 aaPredicted RBP14.85□□□□□ -0.03
COL9A1-201ENST00000320755 SELEP16581 610 aa14.85□□□□□ -0.03
COL9A1-201ENST00000320755 SNRPEP62304 92 aaKnown RBP14.85□□□□□ -0.03
COL9A1-201ENST00000320755 HAGHQ16775 308 aa14.85□□□□□ -0.03
COL9A1-201ENST00000320755 MRPL30Q8TCC3 161 aaKnown RBP14.85□□□□□ -0.03
COL9A1-201ENST00000320755 OR1A1Q9P1Q5 309 aa14.85□□□□□ -0.03
COL9A1-201ENST00000320755 A0A1W2PPH5 198 aa14.85□□□□□ -0.03
COL9A1-201ENST00000320755 HEXAP06865 529 aa14.85□□□□□ -0.03
COL9A1-201ENST00000320755 MPV17LQ2QL34 196 aa14.85□□□□□ -0.03
COL9A1-201ENST00000320755 IL22RA1Q8N6P7 574 aa14.85□□□□□ -0.03
COL9A1-201ENST00000320755 C12orf57Q99622 126 aa14.85□□□□□ -0.03
COL9A1-201ENST00000320755 A0A0G2JRQ6 117 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 FAM90A10PA6NDY2 464 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 FAM90A18PA6NE21 464 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 FAM90A16PA6NEW6 464 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 FAM90A20PA6NIJ5 464 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 FAM90A8PA6NJQ4 464 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 FAM90A7PA6NKC0 464 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 FAM90A22PA8MWA6 464 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 FAM90A12PA8MX19 464 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 FAM90A5PA8MXJ8 464 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 FAM90A23PA8MXZ1 464 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 HSPA12AO43301 675 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 SERPINE2P07093 398 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 FAM90A15PP0C7V4 464 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 FAM90A13PP0C7W8 464 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 FAM90A14PP0C7W9 464 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 FAM90A24PP0C7X0 464 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 VDAC1P21796 283 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 ZNF266Q14584 549 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 TMPRSS7Q7RTY8 843 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 MDP1Q86V88 176 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 IQCF2Q8IXL9 164 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 DDA1Q9BW61 102 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 ATPIF1Q9UII2 106 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 PPP1R3CQ9UQK1 317 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 STRAPQ9Y3F4 350 aaKnown RBP14.84□□□□□ -0.03
COL9A1-201ENST00000320755 ZNF98A6NK75 572 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 DEGS1O15121 323 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 MT-CO3P00414 261 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 PSG2P11465 335 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 PMELP40967 661 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 GNG3P63215 75 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 SLC10A1Q14973 349 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 PCSK4Q6UW60 755 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 HIST1H2BAQ96A08 127 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 PBDC1Q9BVG4 233 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 LYRM2Q9NU23 88 aaPredicted RBP14.84□□□□□ -0.03
COL9A1-201ENST00000320755 hCG_1809904A0A1W2PP81 198 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 A0A1W2PR64 198 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 A0A1W2PRV1 198 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 SP1P08047 785 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 CELA3BP08861 270 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 FAM180AQ6UWF9 173 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 ZNF573Q86YE8 665 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 SAXO1Q8IYX7 474 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 FAM24BQ8N5W8 94 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 SLC25A31Q9H0C2 315 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 DLL3Q9NYJ7 618 aa14.84□□□□□ -0.03
COL9A1-201ENST00000320755 TTC28Q96AY4 2481 aa14.83□□□□□ -0.03
COL9A1-201ENST00000320755 CACNA1HO95180 2353 aa14.83□□□□□ -0.03
COL9A1-201ENST00000320755 A0A1W2PPE2 198 aa14.83□□□□□ -0.04
COL9A1-201ENST00000320755 K7N7A8 449 aa14.83□□□□□ -0.04
COL9A1-201ENST00000320755 TUSC2O75896 110 aa14.83□□□□□ -0.04
COL9A1-201ENST00000320755 CNOT4O95628 575 aaKnown RBP14.83□□□□□ -0.04
COL9A1-201ENST00000320755 IL18BPO95998 194 aa14.83□□□□□ -0.04
COL9A1-201ENST00000320755 RAB5CP51148 216 aa14.83□□□□□ -0.04
COL9A1-201ENST00000320755 NMSQ5H8A3 153 aa14.83□□□□□ -0.04
COL9A1-201ENST00000320755 SLC25A24Q6NUK1 477 aa14.83□□□□□ -0.04
COL9A1-201ENST00000320755 SLC35B3Q9H1N7 401 aa14.83□□□□□ -0.04
COL9A1-201ENST00000320755 TNFSF15O95150 251 aa14.83□□□□□ -0.04
COL9A1-201ENST00000320755 FBP1P09467 338 aa14.83□□□□□ -0.04
COL9A1-201ENST00000320755 UCP1P25874 307 aa14.83□□□□□ -0.04
COL9A1-201ENST00000320755 ERVS71-1P61550 626 aa14.83□□□□□ -0.04
COL9A1-201ENST00000320755 HABP2Q14520 560 aaPredicted RBP14.83□□□□□ -0.04
COL9A1-201ENST00000320755 SFT2D1Q8WV19 159 aa14.83□□□□□ -0.04
COL9A1-201ENST00000320755 F2RP25116 425 aa14.82□□□□□ -0.04
COL9A1-201ENST00000320755 HOXA1P49639 335 aaPredicted RBP14.82□□□□□ -0.04
COL9A1-201ENST00000320755 RAB5BP61020 215 aa14.82□□□□□ -0.04
COL9A1-201ENST00000320755 TMEM267Q0VDI3 215 aaPredicted RBP14.82□□□□□ -0.04
COL9A1-201ENST00000320755 SOHLH1Q5JUK2 328 aa14.82□□□□□ -0.04
COL9A1-201ENST00000320755 ADAM5Q6NVV9 412 aa14.82□□□□□ -0.04
COL9A1-201ENST00000320755 GCNT2Q8N0V5 402 aa14.82□□□□□ -0.04
COL9A1-201ENST00000320755 GPR87Q9BY21 358 aa14.82□□□□□ -0.04
COL9A1-201ENST00000320755 KCNS2Q9ULS6 477 aa14.82□□□□□ -0.04
COL9A1-201ENST00000320755 OR2W1Q9Y3N9 320 aa14.82□□□□□ -0.04
COL9A1-201ENST00000320755 ATXN7O15265 892 aaPredicted RBP14.82□□□□□ -0.04
COL9A1-201ENST00000320755 COX5BP10606 129 aa14.82□□□□□ -0.04
COL9A1-201ENST00000320755 HOXA4Q00056 320 aaPredicted RBP14.82□□□□□ -0.04
COL9A1-201ENST00000320755 HMGN3Q15651 99 aa14.82□□□□□ -0.04
COL9A1-201ENST00000320755 COMMD1Q8N668 190 aa14.82□□□□□ -0.04
COL9A1-201ENST00000320755 C11orf1Q9H5F2 150 aa14.82□□□□□ -0.04
COL9A1-201ENST00000320755 C1orf196B1AJZ1 125 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 PITX3O75364 302 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 CTXN2P0C2S0 81 aa14.81□□□□□ -0.04
COL9A1-201ENST00000320755 IDH3GP51553 393 aaPredicted RBP14.81□□□□□ -0.04
COL9A1-201ENST00000320755 OR2B8PP59922 312 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms