RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 NPBWR2P48146 333 aa8.31□□□□□ -1.08
PTPRA-202ENST00000318266 MLF1P58340 268 aa8.31□□□□□ -1.08
PTPRA-202ENST00000318266 EXT1Q16394 746 aa8.31□□□□□ -1.08
PTPRA-202ENST00000318266 BATFQ16520 125 aa8.31□□□□□ -1.08
PTPRA-202ENST00000318266 OR8G5Q8NG78 346 aa8.31□□□□□ -1.08
PTPRA-202ENST00000318266 SCGB1C1Q8TD33 95 aa8.31□□□□□ -1.08
PTPRA-202ENST00000318266 PIGCQ92535 297 aa8.31□□□□□ -1.08
PTPRA-202ENST00000318266 SIGLEC12Q96PQ1 595 aa8.31□□□□□ -1.08
PTPRA-202ENST00000318266 Q9N2K0 584 aa8.31□□□□□ -1.08
PTPRA-202ENST00000318266 ESPL1Q14674 2120 aa8.31□□□□□ -1.08
PTPRA-202ENST00000318266 FER1L5A0AVI2 2057 aa8.31□□□□□ -1.08
PTPRA-202ENST00000318266 A0A0U1RQV5 110 aa8.31□□□□□ -1.08
PTPRA-202ENST00000318266 MBP02144 154 aa8.31□□□□□ -1.08
PTPRA-202ENST00000318266 GALR1P47211 349 aa8.31□□□□□ -1.08
PTPRA-202ENST00000318266 PNRC1Q12796 327 aaPredicted RBP8.31□□□□□ -1.08
PTPRA-202ENST00000318266 ZNF774Q6NX45 483 aa8.31□□□□□ -1.08
PTPRA-202ENST00000318266 BTNL3Q6UXE8 466 aa8.31□□□□□ -1.08
PTPRA-202ENST00000318266 GPR137CQ8N3F9 429 aa8.31□□□□□ -1.08
PTPRA-202ENST00000318266 C8orf33Q9H7E9 229 aaPredicted RBP8.31□□□□□ -1.08
PTPRA-202ENST00000318266 LRRC3CA6NJW4 275 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 H7BYZ3 331 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 POU2F2P09086 479 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 PAX1P15863 534 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 TCN2P20062 427 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 FASLGP48023 281 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 PAX9P55771 341 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 ZNF705AQ6ZN79 300 aaPredicted RBP8.3□□□□□ -1.08
PTPRA-202ENST00000318266 Q6ZS52 159 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 CALHM1Q8IU99 346 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 MRGPRX4Q96LA9 322 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 OR5B12Q96R08 314 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 ACTR3CQ9C0K3 210 aaPredicted RBP8.3□□□□□ -1.08
PTPRA-202ENST00000318266 SRD5A3Q9H8P0 318 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 A0A1B0GWJ7 208 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 NRASP01111 189 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 SHBQ15464 509 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 DNLZQ5SXM8 178 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 KIAA0895LQ68EN5 471 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 SLC25A26Q70HW3 274 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 H1FOOQ8IZA3 346 aaPredicted RBP8.3□□□□□ -1.08
PTPRA-202ENST00000318266 CISD1Q9NZ45 108 aaKnown RBP8.3□□□□□ -1.08
PTPRA-202ENST00000318266 TAAR3PQ9P1P4 343 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 PRSS50Q9UI38 385 aa8.3□□□□□ -1.08
PTPRA-202ENST00000318266 MAP1LC3B2A6NCE7 125 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 PDCD6O75340 191 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 IGLV3-1P01715 115 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 TK1P04183 234 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 FGF5P12034 268 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 RAB4BP61018 213 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 CST9LP1Q5W188 147 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 PLCXD3Q63HM9 321 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 SP5Q6BEB4 398 aaPredicted RBP8.29□□□□□ -1.08
PTPRA-202ENST00000318266 GATAD1Q8WUU5 269 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 SPTSSAQ969W0 71 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 MAP1LC3BQ9GZQ8 125 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 FGF21Q9NSA1 209 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 TCFL5Q9UL49 500 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 ABCA7Q8IZY2 2146 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 FAM186AA6NE01 2351 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 A0A1B0GX78 115 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 ZNF705FA8MVS1 300 aaPredicted RBP8.29□□□□□ -1.08
PTPRA-202ENST00000318266 ZNF705DP0CH99 300 aaPredicted RBP8.29□□□□□ -1.08
PTPRA-202ENST00000318266 ZNF705BP0CI00 300 aaPredicted RBP8.29□□□□□ -1.08
PTPRA-202ENST00000318266 DEFA4P12838 97 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 VDAC1P21796 283 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 FAM3BP58499 235 aaPredicted RBP8.29□□□□□ -1.08
PTPRA-202ENST00000318266 RPS16P62249 146 aaKnown RBP8.29□□□□□ -1.08
PTPRA-202ENST00000318266 SRPXP78539 464 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 ID3Q02535 119 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 ARL16Q0P5N6 197 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 BSXQ3C1V8 233 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 NMSQ5H8A3 153 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 ZNF468Q5VIY5 522 aaPredicted RBP8.29□□□□□ -1.08
PTPRA-202ENST00000318266 PLPPR1Q8TBJ4 325 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 LHX4Q969G2 390 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 ULBP2Q9BZM5 246 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 IL36RNQ9UBH0 155 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 LRP4O75096 1905 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 URB1O60287 2271 aaKnown RBP8.29□□□□□ -1.08
PTPRA-202ENST00000318266 NPIPA2E9PIF3 369 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 NPIPA3F8WFD2 350 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 M0R143 59 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 ZNF737O75373 536 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 NPSP0C0P6 89 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 ZNF16P17020 682 aaPredicted RBP8.29□□□□□ -1.08
PTPRA-202ENST00000318266 CNN3Q15417 329 aaKnown RBP8.29□□□□□ -1.08
PTPRA-202ENST00000318266 UBALD1Q8TB05 177 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 RNASEH2CQ8TDP1 164 aaKnown RBP8.29□□□□□ -1.08
PTPRA-202ENST00000318266 EXTL1Q92935 676 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 SPSB1Q96BD6 273 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 HS3ST6Q96QI5 342 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 SLC25A22Q9H936 323 aa8.29□□□□□ -1.08
PTPRA-202ENST00000318266 DOCK11Q5JSL3 2073 aa8.28□□□□□ -1.08
PTPRA-202ENST00000318266 DHHO43323 396 aa8.28□□□□□ -1.08
PTPRA-202ENST00000318266 PFN1P07737 140 aaKnown RBP8.28□□□□□ -1.08
PTPRA-202ENST00000318266 CHRNA7P36544 502 aa8.28□□□□□ -1.08
PTPRA-202ENST00000318266 BAXQ07812 192 aa8.28□□□□□ -1.08
PTPRA-202ENST00000318266 IL24Q13007 206 aa8.28□□□□□ -1.08
PTPRA-202ENST00000318266 HERPUD1Q15011 391 aa8.28□□□□□ -1.08
PTPRA-202ENST00000318266 HIST3H3Q16695 136 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms