RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PMPCAQ10713 525 aa11.23□□□□□ -0.61
CPNE1-201ENST00000317677 IL15RAQ13261 267 aa11.23□□□□□ -0.61
CPNE1-201ENST00000317677 KCTD9Q7L273 389 aa11.23□□□□□ -0.61
CPNE1-201ENST00000317677 MRGPRFQ96AM1 343 aa11.23□□□□□ -0.61
CPNE1-201ENST00000317677 BBC3Q96PG8 261 aaPredicted RBP11.23□□□□□ -0.61
CPNE1-201ENST00000317677 RIMS4Q9H426 269 aaPredicted RBP11.23□□□□□ -0.61
CPNE1-201ENST00000317677 FASNP49327 2511 aaKnown RBP11.22□□□□□ -0.61
CPNE1-201ENST00000317677 C13orf42A0A1B0GVH6 325 aa11.22□□□□□ -0.61
CPNE1-201ENST00000317677 IL18BPO95998 194 aa11.22□□□□□ -0.61
CPNE1-201ENST00000317677 ERCC1P07992 297 aaPredicted RBP11.22□□□□□ -0.61
CPNE1-201ENST00000317677 CHATP28329 748 aa11.22□□□□□ -0.61
CPNE1-201ENST00000317677 PCBD1P61457 104 aa11.22□□□□□ -0.61
CPNE1-201ENST00000317677 HAGHQ16775 308 aa11.22□□□□□ -0.61
CPNE1-201ENST00000317677 OR2T2Q6IF00 324 aa11.22□□□□□ -0.61
CPNE1-201ENST00000317677 MCEMP1Q8IX19 187 aa11.22□□□□□ -0.61
CPNE1-201ENST00000317677 NPRL2Q8WTW4 380 aa11.22□□□□□ -0.61
CPNE1-201ENST00000317677 PTX4Q96A99 478 aa11.22□□□□□ -0.61
CPNE1-201ENST00000317677 REEP6Q96HR9 211 aa11.22□□□□□ -0.61
CPNE1-201ENST00000317677 OR10A2Q9H208 303 aa11.22□□□□□ -0.61
CPNE1-201ENST00000317677 PLSCR2Q9NRY7 297 aa11.22□□□□□ -0.61
CPNE1-201ENST00000317677 PIGLQ9Y2B2 252 aa11.22□□□□□ -0.61
CPNE1-201ENST00000317677 FBXO7Q9Y3I1 522 aa11.22□□□□□ -0.61
CPNE1-201ENST00000317677 PRRC2CQ9Y520 2896 aaKnown RBP11.21□□□□□ -0.61
CPNE1-201ENST00000317677 A0A0A6YYD4 124 aa11.21□□□□□ -0.61
CPNE1-201ENST00000317677 A0A1W2PP11 408 aa11.21□□□□□ -0.61
CPNE1-201ENST00000317677 TMEM14DPA8MWL7 114 aa11.21□□□□□ -0.61
CPNE1-201ENST00000317677 BPNT1O95861 308 aa11.21□□□□□ -0.61
CPNE1-201ENST00000317677 LCATP04180 440 aa11.21□□□□□ -0.61
CPNE1-201ENST00000317677 DANCRP0C864 163 aa11.21□□□□□ -0.61
CPNE1-201ENST00000317677 RAB6AP20340 208 aa11.21□□□□□ -0.61
CPNE1-201ENST00000317677 C1QL2Q7Z5L3 287 aa11.21□□□□□ -0.61
CPNE1-201ENST00000317677 ZNF100Q8IYN0 542 aa11.21□□□□□ -0.61
CPNE1-201ENST00000317677 LFNGQ8NES3 379 aa11.21□□□□□ -0.61
CPNE1-201ENST00000317677 CD300LFQ8TDQ1 290 aa11.21□□□□□ -0.61
CPNE1-201ENST00000317677 ABHD5Q8WTS1 349 aa11.21□□□□□ -0.61
CPNE1-201ENST00000317677 Q8WTZ3 238 aa11.21□□□□□ -0.61
CPNE1-201ENST00000317677 FAM46BQ96A09 425 aa11.21□□□□□ -0.61
CPNE1-201ENST00000317677 CMBLQ96DG6 245 aa11.21□□□□□ -0.61
CPNE1-201ENST00000317677 OR5AC2Q9NZP5 309 aa11.21□□□□□ -0.61
CPNE1-201ENST00000317677 MGAQ8IWI9 3026 aa11.21□□□□□ -0.61
CPNE1-201ENST00000317677 AQP7O14520 342 aa11.21□□□□□ -0.62
CPNE1-201ENST00000317677 OR5AC1P0C628 307 aa11.21□□□□□ -0.62
CPNE1-201ENST00000317677 SEC11BP0C7V7 166 aa11.21□□□□□ -0.62
CPNE1-201ENST00000317677 EPHA1P21709 976 aa11.21□□□□□ -0.62
CPNE1-201ENST00000317677 NPY4RP50391 375 aa11.21□□□□□ -0.62
CPNE1-201ENST00000317677 GUSBP1Q15486 140 aa11.21□□□□□ -0.62
CPNE1-201ENST00000317677 MIDNQ504T8 468 aa11.21□□□□□ -0.62
CPNE1-201ENST00000317677 SOHLH1Q5JUK2 328 aa11.21□□□□□ -0.62
CPNE1-201ENST00000317677 IGFL3Q6UXB1 125 aa11.21□□□□□ -0.62
CPNE1-201ENST00000317677 TMEM104Q8NE00 496 aa11.21□□□□□ -0.62
CPNE1-201ENST00000317677 OR4K15Q8NH41 348 aa11.21□□□□□ -0.62
CPNE1-201ENST00000317677 SVIPQ8NHG7 77 aa11.21□□□□□ -0.62
CPNE1-201ENST00000317677 EIF5A2Q9GZV4 153 aaKnown RBP11.21□□□□□ -0.62
CPNE1-201ENST00000317677 FBLN5Q9UBX5 448 aa11.21□□□□□ -0.62
CPNE1-201ENST00000317677 MRPS28Q9Y2Q9 187 aaKnown RBP11.21□□□□□ -0.62
CPNE1-201ENST00000317677 COL6A6A6NMZ7 2263 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 hCG_38984A0A1B0GV85 526 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 TRDCB7Z8K6 153 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 SS18L1O75177 396 aaPredicted RBP11.2□□□□□ -0.62
CPNE1-201ENST00000317677 CXCL1P09341 107 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 TRGC1P0CF51 173 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 CCL2P13500 99 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 TBPP20226 339 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 OR3A2P47893 321 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 ERVFC1-1P60608 527 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 ZNF92Q03936 586 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 GLIPR1L1Q6UWM5 242 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 COLCA1Q6ZS62 124 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 ZNF584Q8IVC4 421 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 NICN1Q9BSH3 213 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 LPAR5Q9H1C0 372 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 ZMAT3Q9HA38 289 aaKnown RBP11.2□□□□□ -0.62
CPNE1-201ENST00000317677 GPR173Q9NS66 373 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 RAB22AQ9UL26 194 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 STRAPQ9Y3F4 350 aaKnown RBP11.2□□□□□ -0.62
CPNE1-201ENST00000317677 MMP24Q9Y5R2 645 aa11.2□□□□□ -0.62
CPNE1-201ENST00000317677 TMEM235A6NFC5 223 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 TRGC2P03986 189 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 KISS1Q15726 138 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 HIKESHIQ53FT3 197 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 TMEM183AQ8IXX5 376 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 GCNT2Q8N0V5 402 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 OR5D18Q8NGL1 313 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 OR1K1Q8NGR3 316 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 CASTOR1Q8WTX7 329 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 PIGTQ969N2 578 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 C2orf50Q96LR7 162 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 TRIB1Q96RU8 372 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 C1QTNF5Q9BXJ0 243 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 GP6Q9HCN6 339 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 LUZP4Q9P127 313 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 PIEZO2Q9H5I5 2752 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 TMEM210A6NLX4 147 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 ITGB1BP1O14713 200 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 NPSP0C0P6 89 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 DLK1P80370 383 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 ZNF260Q3ZCT1 412 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 TMEM128Q5BJH2 165 aa11.19□□□□□ -0.62
CPNE1-201ENST00000317677 COA6Q5JTJ3 125 aaKnown RBP11.19□□□□□ -0.62
CPNE1-201ENST00000317677 FBXW9Q5XUX1 488 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms