RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 OR52M1Q8NGK5 317 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 ARL11Q969Q4 196 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 PLCXD1Q9NUJ7 323 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 PSORS1C1Q9UIG5 152 aa14.16□□□□□ -0.14
TPM1-203ENST00000317516 MRPS28Q9Y2Q9 187 aaKnown RBP14.16□□□□□ -0.14
TPM1-203ENST00000317516 TSSC4Q9Y5U2 329 aaPredicted RBP14.16□□□□□ -0.14
TPM1-203ENST00000317516 TRBV5-7A0A0A0MS05 114 aa14.15□□□□□ -0.14
TPM1-203ENST00000317516 TRAV39A0A0B4J263 110 aa14.15□□□□□ -0.14
TPM1-203ENST00000317516 A0A1W2PPK0 400 aa14.15□□□□□ -0.14
TPM1-203ENST00000317516 ADARB2-AS1A8MUL3 147 aa14.15□□□□□ -0.14
TPM1-203ENST00000317516 MCRIP1C9JLW8 97 aa14.15□□□□□ -0.14
TPM1-203ENST00000317516 ORC5O43913 435 aa14.15□□□□□ -0.14
TPM1-203ENST00000317516 GAPDHP04406 335 aaKnown RBP14.15□□□□□ -0.14
TPM1-203ENST00000317516 SNRNP70P08621 437 aaKnown RBP14.15□□□□□ -0.14
TPM1-203ENST00000317516 CELP19835 753 aa14.15□□□□□ -0.14
TPM1-203ENST00000317516 MAPK3P27361 379 aaPredicted RBP14.15□□□□□ -0.14
TPM1-203ENST00000317516 WNT4P56705 351 aa14.15□□□□□ -0.14
TPM1-203ENST00000317516 KPRPQ5T749 579 aaPredicted RBP14.15□□□□□ -0.14
TPM1-203ENST00000317516 GLIPR1L1Q6UWM5 242 aa14.15□□□□□ -0.14
TPM1-203ENST00000317516 REC114Q7Z4M0 266 aa14.15□□□□□ -0.14
TPM1-203ENST00000317516 DRAM1Q8N682 238 aa14.15□□□□□ -0.14
TPM1-203ENST00000317516 BPIFB6Q8NFQ5 453 aa14.15□□□□□ -0.14
TPM1-203ENST00000317516 OR56B4Q8NH76 319 aa14.15□□□□□ -0.14
TPM1-203ENST00000317516 MUL1Q969V5 352 aa14.15□□□□□ -0.14
TPM1-203ENST00000317516 OR14A2Q96R54 314 aa14.15□□□□□ -0.14
TPM1-203ENST00000317516 ERGIC3Q9Y282 383 aa14.15□□□□□ -0.14
TPM1-203ENST00000317516 TRAV8-7A0A075B6U6 113 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 PNMA8CA0A1B0GUJ8 204 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 A0A1W2PRX2 142 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 AIPO00170 330 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 MT-ND4P03905 459 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 MAS1P04201 325 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 AMY1AP04745 511 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 AMY2AP04746 511 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 GNAO1P09471 354 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 PF4V1P10720 104 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 TMEM11P17152 192 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 DOC2BQ14184 412 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 OGFRL1Q5TC84 451 aaPredicted RBP14.14□□□□□ -0.15
TPM1-203ENST00000317516 AWAT2Q6E213 333 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 ZNF497Q6ZNH5 498 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 AHSA2Q719I0 299 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 CCDC107Q8WV48 283 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 ZNF581Q9P0T4 197 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 TRAPPC2LQ9UL33 140 aa14.14□□□□□ -0.15
TPM1-203ENST00000317516 A0A1W2PP11 408 aa14.13□□□□□ -0.15
TPM1-203ENST00000317516 A0A1W2PPI3 338 aa14.13□□□□□ -0.15
TPM1-203ENST00000317516 CCRL2O00421 344 aa14.13□□□□□ -0.15
TPM1-203ENST00000317516 SDCBPO00560 298 aaPredicted RBP14.13□□□□□ -0.15
TPM1-203ENST00000317516 CASQ2O14958 399 aaPredicted RBP14.13□□□□□ -0.15
TPM1-203ENST00000317516 IL3RAP26951 378 aa14.13□□□□□ -0.15
TPM1-203ENST00000317516 Q3ZCU0 254 aa14.13□□□□□ -0.15
TPM1-203ENST00000317516 NANOGP1Q8N7R0 232 aa14.13□□□□□ -0.15
TPM1-203ENST00000317516 NKAIN3Q8N8D7 197 aa14.13□□□□□ -0.15
TPM1-203ENST00000317516 C8orf31Q8N9H6 132 aa14.13□□□□□ -0.15
TPM1-203ENST00000317516 FBLIM1Q8WUP2 373 aa14.13□□□□□ -0.15
TPM1-203ENST00000317516 DERL3Q96Q80 235 aa14.13□□□□□ -0.15
TPM1-203ENST00000317516 MAGEA13PA6NCF6 341 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 FAM90A10PA6NDY2 464 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 FAM90A7PA6NKC0 464 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 FAM90A23PA8MXZ1 464 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 C15orf65H3BRN8 121 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 HSD17B6O14756 317 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 SPINT2O43291 252 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 FGF16O43320 207 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 CA11O75493 328 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 CD33P20138 364 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 ZNF816Q0VGE8 651 aaPredicted RBP14.12□□□□□ -0.15
TPM1-203ENST00000317516 HNF4GQ14541 408 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 TMEM30BQ3MIR4 351 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 OXLD1Q5BKU9 147 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 C6orf183Q5T699 404 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 RAB12Q6IQ22 244 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 MOB3BQ86TA1 216 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 LINC00311Q8N616 119 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 WFDC9Q8NEX5 89 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 SGCDQ92629 289 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 MYDGFQ969H8 173 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 UQCC2Q9BRT2 126 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 GFOD1Q9NXC2 390 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 ETAA1Q9NY74 926 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 RCC2Q9P258 522 aaKnown RBP14.12□□□□□ -0.15
TPM1-203ENST00000317516 GHRLQ9UBU3 117 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 PEX16Q9Y5Y5 336 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 TGP01266 2768 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 NOTCH3Q9UM47 2321 aa14.12□□□□□ -0.15
TPM1-203ENST00000317516 A0A1W2PPE3 182 aa14.11□□□□□ -0.15
TPM1-203ENST00000317516 PSMB11A5LHX3 300 aa14.11□□□□□ -0.15
TPM1-203ENST00000317516 SH2D7A6NKC9 451 aaPredicted RBP14.11□□□□□ -0.15
TPM1-203ENST00000317516 IGKV1D-33P01593 117 aa14.11□□□□□ -0.15
TPM1-203ENST00000317516 IGKV1-33P01594 117 aa14.11□□□□□ -0.15
TPM1-203ENST00000317516 PF4P02776 101 aa14.11□□□□□ -0.15
TPM1-203ENST00000317516 GLAP06280 429 aa14.11□□□□□ -0.15
TPM1-203ENST00000317516 DIAPH2-AS1Q14236 149 aa14.11□□□□□ -0.15
TPM1-203ENST00000317516 FBLN7Q53RD9 439 aa14.11□□□□□ -0.15
TPM1-203ENST00000317516 TCTEX1D4Q5JR98 221 aa14.11□□□□□ -0.15
TPM1-203ENST00000317516 KHDC1LQ5JSQ8 128 aa14.11□□□□□ -0.15
TPM1-203ENST00000317516 SYT6Q5T7P8 510 aaPredicted RBP14.11□□□□□ -0.15
TPM1-203ENST00000317516 LAIR2Q6ISS4 152 aa14.11□□□□□ -0.15
TPM1-203ENST00000317516 TRAT1Q6PIZ9 186 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms