RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 GAPTQ8N292 157 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 RPS4Y2Q8TD47 263 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 LINC00052Q96N35 136 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 P2RX4Q99571 388 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 SFXN3Q9BWM7 321 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 PITPNC1Q9UKF7 332 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 COL11A1P12107 1806 aaPredicted RBP12.48□□□□□ -0.41
TRIM25-201ENST00000316881 RPL36A-HNRNPH2H7BZ11 118 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 SOCS1O15524 211 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 CPN1P15169 458 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 TUSC1Q2TAM9 212 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 PRSS54Q6PEW0 395 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 MRGPRGQ86SM5 289 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 KLHDC1Q8N7A1 406 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 OR1L6Q8NGR2 347 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 ZNF552Q9H707 407 aaPredicted RBP12.48□□□□□ -0.41
TRIM25-201ENST00000316881 INHBBP09529 407 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 MESP2Q0VG99 397 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 FAM209AQ5JX71 171 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 C5orf17Q8NAS9 161 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 STXBP6Q8NFX7 210 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 RGPD4Q7Z3J3 1758 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 MIA3Q5JRA6 1907 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 RAB29O14966 203 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 FCARP24071 287 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 IZUMO4Q1ZYL8 232 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 OR2V2Q96R30 315 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 CCL13Q99616 98 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 ZNF426Q9BUY5 554 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 NAT8BQ9UHF3 227 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 HS3ST3B1Q9Y662 390 aa12.48□□□□□ -0.41
TRIM25-201ENST00000316881 SMPD2O60906 423 aa12.47□□□□□ -0.41
TRIM25-201ENST00000316881 CCL28Q9NRJ3 127 aa12.47□□□□□ -0.41
TRIM25-201ENST00000316881 ANKRD20A5PA0PJZ0 165 aa12.47□□□□□ -0.41
TRIM25-201ENST00000316881 NEURL1O76050 574 aa12.47□□□□□ -0.41
TRIM25-201ENST00000316881 CLDN14O95500 239 aa12.47□□□□□ -0.41
TRIM25-201ENST00000316881 ACAA2P42765 397 aaKnown RBP12.47□□□□□ -0.41
TRIM25-201ENST00000316881 IFITM3Q01628 133 aa12.47□□□□□ -0.41
TRIM25-201ENST00000316881 TRAPPC1Q9Y5R8 145 aa12.47□□□□□ -0.41
TRIM25-201ENST00000316881 NRXN2Q9P2S2 1712 aa12.47□□□□□ -0.41
TRIM25-201ENST00000316881 PDLIM4P50479 330 aa12.47□□□□□ -0.41
TRIM25-201ENST00000316881 Q9N2K0 584 aa12.47□□□□□ -0.41
TRIM25-201ENST00000316881 ZFC3H1O60293 1989 aaKnown RBP12.47□□□□□ -0.41
TRIM25-201ENST00000316881 MC5RP33032 325 aa12.47□□□□□ -0.41
TRIM25-201ENST00000316881 GALR1P47211 349 aa12.47□□□□□ -0.41
TRIM25-201ENST00000316881 KRTDAPP60985 99 aa12.47□□□□□ -0.41
TRIM25-201ENST00000316881 POLR2GP62487 172 aaKnown RBP eCLIP12.47□□□□□ -0.41
TRIM25-201ENST00000316881 PILRAQ9UKJ1 303 aa12.47□□□□□ -0.41
TRIM25-201ENST00000316881 OR4C45A6NMZ5 311 aa12.46□□□□□ -0.41
TRIM25-201ENST00000316881 ZNF883P0CG24 379 aa12.46□□□□□ -0.41
TRIM25-201ENST00000316881 CEACAM1P13688 526 aa12.46□□□□□ -0.41
TRIM25-201ENST00000316881 ZNF79Q15937 498 aa12.46□□□□□ -0.41
TRIM25-201ENST00000316881 RPS4XP62701 263 aaKnown RBP12.46□□□□□ -0.41
TRIM25-201ENST00000316881 OR4X1Q8NH49 305 aa12.46□□□□□ -0.41
TRIM25-201ENST00000316881 TO15178 435 aa12.46□□□□□ -0.41
TRIM25-201ENST00000316881 MPC2O95563 127 aa12.46□□□□□ -0.41
TRIM25-201ENST00000316881 FOXL2P58012 376 aa12.46□□□□□ -0.41
TRIM25-201ENST00000316881 PSG4Q00888 419 aa12.46□□□□□ -0.41
TRIM25-201ENST00000316881 GCSAMQ8N6F7 178 aa12.46□□□□□ -0.41
TRIM25-201ENST00000316881 TSPAN2O60636 221 aa12.46□□□□□ -0.42
TRIM25-201ENST00000316881 PIGYQ3MUY2 71 aa12.46□□□□□ -0.42
TRIM25-201ENST00000316881 C10orf113Q5VZT2 155 aa12.46□□□□□ -0.42
TRIM25-201ENST00000316881 NIT2Q9NQR4 276 aa12.46□□□□□ -0.42
TRIM25-201ENST00000316881 PARP11Q9NR21 331 aa12.46□□□□□ -0.42
TRIM25-201ENST00000316881 PLXNB2O15031 1838 aa12.46□□□□□ -0.42
TRIM25-201ENST00000316881 PLA2G10O15496 165 aa12.46□□□□□ -0.42
TRIM25-201ENST00000316881 STARD4Q96DR4 205 aa12.46□□□□□ -0.42
TRIM25-201ENST00000316881 PF4V1P10720 104 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 REG1BP48304 166 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 GFRA1P56159 465 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 GUCA2BQ16661 112 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 RPEL1Q2QD12 228 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 CEACAM21Q3KPI0 293 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 ITLN1Q8WWA0 313 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 RBM14Q96PK6 669 aaKnown RBP12.45□□□□□ -0.42
TRIM25-201ENST00000316881 GPA33Q99795 319 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 HILPDAQ9Y5L2 63 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 TEX50A0A1B0GTY4 177 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 P2RY1P47900 373 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 IL19Q9UHD0 177 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 J3QR06 171 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 NPY1RP25929 384 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 FAM78BQ5VT40 261 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 RNASEKQ6P5S7 137 aaKnown RBP12.45□□□□□ -0.42
TRIM25-201ENST00000316881 UQCC3Q6UW78 93 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 TAF1LQ8IZX4 1826 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 J3KRW8 73 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 DXOO77932 396 aaKnown RBP12.45□□□□□ -0.42
TRIM25-201ENST00000316881 MBPP02686 304 aaPredicted RBP12.45□□□□□ -0.42
TRIM25-201ENST00000316881 CALHM1Q8IU99 346 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 CCL19Q99731 98 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 MIOXQ9UGB7 285 aa12.45□□□□□ -0.42
TRIM25-201ENST00000316881 CTDSPLO15194 276 aa12.44□□□□□ -0.42
TRIM25-201ENST00000316881 CSRP3P50461 194 aa12.44□□□□□ -0.42
TRIM25-201ENST00000316881 SIGIRRQ6IA17 410 aa12.44□□□□□ -0.42
TRIM25-201ENST00000316881 EBLN2Q6P2I7 272 aa12.44□□□□□ -0.42
TRIM25-201ENST00000316881 MANBALQ9NQG1 85 aa12.44□□□□□ -0.42
TRIM25-201ENST00000316881 ZNF107Q9UII5 783 aaPredicted RBP12.44□□□□□ -0.42
TRIM25-201ENST00000316881 A0A1W2PS18 150 aa12.44□□□□□ -0.42
TRIM25-201ENST00000316881 CSF2RBP32927 897 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms