RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 PTBP3O95758 552 aaKnown RBP14.77□□□□□ -0.05
SCAMP4-201ENST00000316097 PKIAP61925 76 aa14.77□□□□□ -0.05
SCAMP4-201ENST00000316097 LSM6P62312 80 aaKnown RBP14.77□□□□□ -0.05
SCAMP4-201ENST00000316097 PLGLB1Q02325 96 aa14.77□□□□□ -0.05
SCAMP4-201ENST00000316097 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.77□□□□□ -0.05
SCAMP4-201ENST00000316097 LILRB2Q8N423 598 aa14.77□□□□□ -0.05
SCAMP4-201ENST00000316097 TMEM251Q8N6I4 163 aa14.77□□□□□ -0.05
SCAMP4-201ENST00000316097 OR8G5Q8NG78 346 aa14.77□□□□□ -0.05
SCAMP4-201ENST00000316097 ABHD5Q8WTS1 349 aa14.77□□□□□ -0.05
SCAMP4-201ENST00000316097 MAGT1Q9H0U3 335 aa14.77□□□□□ -0.05
SCAMP4-201ENST00000316097 FOXD3Q9UJU5 478 aaPredicted RBP14.77□□□□□ -0.05
SCAMP4-201ENST00000316097 LOC102725191A0A1B0GVB3 256 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 TM4SF5O14894 197 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 ZNHIT1O43257 154 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 SSSCA1O60232 199 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 PITX3O75364 302 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 HSPB1P04792 205 aaKnown RBP14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 SP1P08047 785 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 NDUFB7P17568 137 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 RUNX1Q01196 453 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 KCNMB1Q16558 191 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 OR5C1Q8NGR4 320 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 ADGRG7Q96K78 797 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 METTL9Q9H1A3 318 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 A0A0U1RQV5 110 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 HSPA12AO43301 675 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 IGHV3-9P01782 118 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 DTYMKP23919 212 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 NKX2-1P43699 371 aaPredicted RBP14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 HIST2H3PS2Q5TEC6 136 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 OR13D1Q8NGV5 346 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 KCNE4Q8WWG9 221 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 ZNF552Q9H707 407 aaPredicted RBP14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 SHANK1Q9Y566 2161 aa14.76□□□□□ -0.05
SCAMP4-201ENST00000316097 GJE1A6NN92 205 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 SLC33A1O00400 549 aaPredicted RBP14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 CST7O76096 145 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 MEOX1P50221 254 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 RPL23AP62750 156 aaKnown RBP14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 ZNF506Q5JVG8 444 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 TMEM123Q8N131 208 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 TMEM217Q8N7C4 229 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 OR10AD1Q8NGE0 317 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 OR2V1Q8NHB1 315 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 FAM210BQ96KR6 192 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 DNAJC13O75165 2243 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 DMXL2Q8TDJ6 3036 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 SLC31A2O15432 143 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 CTSSP25774 331 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 GUCA1AP43080 201 aaPredicted RBP14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 PRSS12P56730 875 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 ARG2P78540 354 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 PMP22Q01453 160 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 TMEM252Q8N6L7 170 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 CPNE4Q96A23 557 aaPredicted RBP14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 PACRGQ96M98 296 aaPredicted RBP14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 DEFB127Q9H1M4 99 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 C11orf1Q9H5F2 150 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 GLRX2Q9NS18 164 aa14.75□□□□□ -0.05
SCAMP4-201ENST00000316097 WISP2O76076 250 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 EPHA1P21709 976 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 DYNLT3P51808 116 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 HERV-K104P61576 105 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 RNFT1Q5M7Z0 435 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 SLC35E3Q7Z769 313 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 CCDC71LQ8N9Z2 235 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 FDCSPQ8NFU4 85 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 CLDND2Q8NHS1 167 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 PLEKHF2Q9H8W4 249 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 ZNF716A6NP11 495 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 TLX3O43711 291 aaPredicted RBP14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 VAMP5O95183 116 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 CEACAM1P13688 526 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 AADACP22760 399 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 HLA-DRB3P79483 266 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 AKR1C8PQ5T2L2 129 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 C1orf87Q8N0U7 546 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 MDS2Q8NDY4 140 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 GJC3Q8NFK1 279 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 MOB3AQ96BX8 217 aa14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 ALKBH3Q96Q83 286 aaPredicted RBP14.74□□□□□ -0.05
SCAMP4-201ENST00000316097 PROB1E7EW31 1015 aa14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 GEMIN2O14893 280 aaKnown RBP14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 MSR1P21757 451 aa14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 TAS2R60P59551 318 aa14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 VAMP2P63027 116 aa14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 RSPO1Q2MKA7 263 aaPredicted RBP14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 SNAI3Q3KNW1 292 aa14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 PIGYQ3MUY2 71 aa14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 DPPA2Q7Z7J5 298 aa14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 RNASE11Q8TAA1 199 aaKnown RBP14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 PTPRBP23467 1997 aa14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 C3orf85A0A1B0GTC6 90 aa14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 M0R135 149 aa14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 NXPH3O95157 252 aa14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 PATE4P0C8F1 98 aa14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 LHX2P50458 406 aa14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 PDCD1Q15116 288 aa14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 CXorf66Q5JRM2 361 aaPredicted RBP14.73□□□□□ -0.05
SCAMP4-201ENST00000316097 OR2AE1Q8NHA4 323 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms