RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 BTN1A1Q13410 526 aa11.73□□□□□ -0.53
RFFL-201ENST00000315249 MPV17LQ2QL34 196 aa11.73□□□□□ -0.53
RFFL-201ENST00000315249 C17orf51A8MQB3 221 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 TMEM229AB2RXF0 380 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 ASAH2BP0C7U1 165 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 SMIM10L1P0DMW3 83 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 TFPI2P48307 235 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 FAM3AP98173 230 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 SMIM10Q96HG1 83 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 FOXD3Q9UJU5 478 aaPredicted RBP11.72□□□□□ -0.53
RFFL-201ENST00000315249 TICRRQ7Z2Z1 1910 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 C20orf202A1L168 122 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 ZNF485Q8NCK3 441 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 DCTN5Q9BTE1 182 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 CHST5Q9GZS9 411 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 RYDENQ9NUL5 291 aaKnown RBP11.72□□□□□ -0.53
RFFL-201ENST00000315249 IGHV1-69-2A0A0G2JMI3 117 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 SNRPGP15A8MWD9 76 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 DXOO77932 396 aaKnown RBP11.72□□□□□ -0.53
RFFL-201ENST00000315249 ERVFC1-1P60608 527 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 HLA-DRB3P79483 266 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 ZDHHC22Q8N966 263 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 CHRDL1Q9BU40 450 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 VWA8A3KMH1 1905 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 KLF14Q8TD94 323 aaPredicted RBP11.72□□□□□ -0.53
RFFL-201ENST00000315249 ITPKCQ96DU7 683 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 GBF1Q92538 1859 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 TEX30Q5JUR7 227 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 MIOXQ9UGB7 285 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 ANXA10Q9UJ72 324 aa11.72□□□□□ -0.53
RFFL-201ENST00000315249 NKX2-6A6NCS4 301 aa11.71□□□□□ -0.53
RFFL-201ENST00000315249 DAOP14920 347 aa11.71□□□□□ -0.53
RFFL-201ENST00000315249 UNQ6494/PRO21346Q6UXR6 183 aa11.71□□□□□ -0.53
RFFL-201ENST00000315249 GAPTQ8N292 157 aa11.71□□□□□ -0.53
RFFL-201ENST00000315249 Q8WTZ3 238 aa11.71□□□□□ -0.53
RFFL-201ENST00000315249 CEACAM21Q3KPI0 293 aa11.71□□□□□ -0.53
RFFL-201ENST00000315249 OR8I2Q8N0Y5 310 aa11.71□□□□□ -0.53
RFFL-201ENST00000315249 BTF3L4Q96K17 158 aa11.71□□□□□ -0.53
RFFL-201ENST00000315249 A0A0G2JMM0 328 aa11.71□□□□□ -0.53
RFFL-201ENST00000315249 A0A1W2PPB8 328 aa11.71□□□□□ -0.53
RFFL-201ENST00000315249 A0A1W2PRS3 328 aa11.71□□□□□ -0.53
RFFL-201ENST00000315249 KIR3DP1A8MWS1 328 aa11.71□□□□□ -0.53
RFFL-201ENST00000315249 APOBEC3AP31941 199 aaPredicted RBP11.71□□□□□ -0.53
RFFL-201ENST00000315249 G6PCP35575 357 aa11.71□□□□□ -0.53
RFFL-201ENST00000315249 PPP1R1AQ13522 171 aa11.71□□□□□ -0.53
RFFL-201ENST00000315249 SNAI3Q3KNW1 292 aa11.71□□□□□ -0.53
RFFL-201ENST00000315249 PRR13Q9NZ81 148 aa11.71□□□□□ -0.53
RFFL-201ENST00000315249 WDR81Q562E7 1941 aa11.71□□□□□ -0.53
RFFL-201ENST00000315249 PPIAL4CA0A0B4J2A2 164 aa11.71□□□□□ -0.54
RFFL-201ENST00000315249 PPIAL4GP0DN37 164 aa11.71□□□□□ -0.54
RFFL-201ENST00000315249 SSX1Q16384 188 aa11.71□□□□□ -0.54
RFFL-201ENST00000315249 CENPVQ7Z7K6 275 aaPredicted RBP11.71□□□□□ -0.54
RFFL-201ENST00000315249 RAB40CQ96S21 281 aa11.71□□□□□ -0.54
RFFL-201ENST00000315249 SMIM7Q9BQ49 75 aa11.71□□□□□ -0.54
RFFL-201ENST00000315249 OR51I2Q9H344 312 aa11.71□□□□□ -0.54
RFFL-201ENST00000315249 MTFP1Q9UDX5 166 aa11.71□□□□□ -0.54
RFFL-201ENST00000315249 ROS1P08922 2347 aa11.71□□□□□ -0.54
RFFL-201ENST00000315249 LALBAP00709 142 aa11.71□□□□□ -0.54
RFFL-201ENST00000315249 GAPDHP04406 335 aaKnown RBP11.71□□□□□ -0.54
RFFL-201ENST00000315249 SUCLG1P53597 346 aaKnown RBP11.71□□□□□ -0.54
RFFL-201ENST00000315249 OR5C1Q8NGR4 320 aa11.71□□□□□ -0.54
RFFL-201ENST00000315249 FAM57AQ8TBR7 257 aa11.71□□□□□ -0.54
RFFL-201ENST00000315249 CCL28Q9NRJ3 127 aa11.71□□□□□ -0.54
RFFL-201ENST00000315249 SCN8AQ9UQD0 1980 aa11.71□□□□□ -0.54
RFFL-201ENST00000315249 RAB29O14966 203 aa11.71□□□□□ -0.54
RFFL-201ENST00000315249 KLHDC2Q9Y2U9 406 aa11.71□□□□□ -0.54
RFFL-201ENST00000315249 PRSS53Q2L4Q9 553 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 SCARB1Q8WTV0 552 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 GPA33Q99795 319 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 HDHD3Q9BSH5 251 aaPredicted RBP11.7□□□□□ -0.54
RFFL-201ENST00000315249 YLPM1P49750 1951 aaKnown RBP11.7□□□□□ -0.54
RFFL-201ENST00000315249 WISP3O95389 354 aaPredicted RBP11.7□□□□□ -0.54
RFFL-201ENST00000315249 DUSP18Q8NEJ0 188 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 OR8G5Q8NG78 346 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 YAE1D1Q9NRH1 226 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 DOCK4Q8N1I0 1966 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 UMAD1C9J7I0 102 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 H7BYZ3 331 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 OGG1O15527 345 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 SYNGR1O43759 233 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 PF4P02776 101 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 SPP1P10451 314 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 FGF9P31371 208 aaPredicted RBP11.7□□□□□ -0.54
RFFL-201ENST00000315249 DMKNQ6E0U4 476 aaPredicted RBP11.7□□□□□ -0.54
RFFL-201ENST00000315249 RBM14Q96PK6 669 aaKnown RBP11.7□□□□□ -0.54
RFFL-201ENST00000315249 C9orf170A2RU37 121 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 B9A039 149 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 BSPH1Q075Z2 132 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 FAM168AQ92567 244 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 NUDT16L1Q9BRJ7 211 aaKnown RBP11.7□□□□□ -0.54
RFFL-201ENST00000315249 ZNF716A6NP11 495 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 NTF3P20783 257 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 LCN2P80188 198 aa11.7□□□□□ -0.54
RFFL-201ENST00000315249 TRAV8-7A0A075B6U6 113 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 XAF1Q6GPH4 301 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 MRGPRFQ96AM1 343 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 ZNF703Q9H7S9 590 aaPredicted RBP11.69□□□□□ -0.54
RFFL-201ENST00000315249 OR2C1O95371 312 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 PAX5Q02548 391 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 NUP37Q8NFH4 326 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms