RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 FAM90A7PA6NKC0 464 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 FAM90A22PA8MWA6 464 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 FAM90A12PA8MX19 464 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 FAM90A5PA8MXJ8 464 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 FAM90A23PA8MXZ1 464 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 MGST3O14880 152 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 NUPL2O15504 423 aaKnown RBP11.76□□□□□ -0.53
DDX54-202ENST00000314045 FAM90A15PP0C7V4 464 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 FAM90A13PP0C7W8 464 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 FAM90A14PP0C7W9 464 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 FAM90A24PP0C7X0 464 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 GLRXP35754 106 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 FAM74A1Q5RGS3 127 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 CCL13Q99616 98 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 ALX4Q9H161 411 aaPredicted RBP11.76□□□□□ -0.53
DDX54-202ENST00000314045 VSIG4Q9Y279 399 aa11.76□□□□□ -0.53
DDX54-202ENST00000314045 FER1L5A0AVI2 2057 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 RPL31P62899 125 aaKnown RBP11.75□□□□□ -0.53
DDX54-202ENST00000314045 BTNL3Q6UXE8 466 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 ASCL5Q7RTU5 278 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 DLL3Q9NYJ7 618 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 HSF4Q9ULV5 492 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 USF3Q68DE3 2245 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 TDGF1P13385 188 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 VDAC1P21796 283 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 CHATP28329 748 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 ERVS71-1P61550 626 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 TESK1Q15569 626 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 VMA21Q3ZAQ7 101 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 IGSF11Q5DX21 431 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 H3F3CQ6NXT2 135 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 PINX1Q96BK5 328 aaKnown RBP11.75□□□□□ -0.53
DDX54-202ENST00000314045 ZNF319Q9P2F9 582 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 FOXD3Q9UJU5 478 aaPredicted RBP11.75□□□□□ -0.53
DDX54-202ENST00000314045 V9GYS6 101 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 TP53BP1Q12888 1972 aaPredicted RBP11.75□□□□□ -0.53
DDX54-202ENST00000314045 ACACBO00763 2458 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 OBSL1O75147 1896 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 KRBOX1C9JBD0 128 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 CST4P01036 141 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 SOHLH1Q5JUK2 328 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 Q6ZRG5 221 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 SAXO1Q8IYX7 474 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 OR11H7Q8NGC8 314 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 MITD1Q8WV92 249 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 POM121L2Q96KW2 1035 aa11.75□□□□□ -0.53
DDX54-202ENST00000314045 ADH4P08319 380 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 CLN8Q9UBY8 286 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 OPN4Q9UHM6 478 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 RNF115Q9Y4L5 304 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 PLXND1Q9Y4D7 1925 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 SS18L1O75177 396 aaPredicted RBP11.74□□□□□ -0.53
DDX54-202ENST00000314045 SNRNP70P08621 437 aaKnown RBP11.74□□□□□ -0.53
DDX54-202ENST00000314045 PRRX1P54821 245 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 FAM208BQ5VWN6 2430 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 ARV1Q9H2C2 271 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 ELOVL5Q9NYP7 299 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 IL19Q9UHD0 177 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 ZDHHC8Q9ULC8 765 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 LRRK1Q38SD2 2015 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 WDR87Q6ZQQ6 2873 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 CELA3BP08861 270 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 SCTP09683 121 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 PPP1CCP36873 323 aaKnown RBP11.74□□□□□ -0.53
DDX54-202ENST00000314045 UNC119Q13432 240 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 PRSS54Q6PEW0 395 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 OR8B3Q8NGG8 313 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 NANPQ8TBE9 248 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 MRPL24Q96A35 216 aaKnown RBP11.74□□□□□ -0.53
DDX54-202ENST00000314045 OR8B2Q96RD0 313 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 RAB40CQ96S21 281 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 PUS1Q9Y606 427 aaKnown RBP eCLIP11.74□□□□□ -0.53
DDX54-202ENST00000314045 PLXNB3Q9ULL4 1909 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 BTBD17A6NE02 478 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 SMPD2O60906 423 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 LINC01560Q8TB33 94 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 OR5P3Q8WZ94 311 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 ADTRPQ96IZ2 230 aa11.74□□□□□ -0.53
DDX54-202ENST00000314045 A0A1W2PRD5 423 aa11.73□□□□□ -0.53
DDX54-202ENST00000314045 A0A1W2PRF3 423 aa11.73□□□□□ -0.53
DDX54-202ENST00000314045 A0A1W2PRM7 423 aa11.73□□□□□ -0.53
DDX54-202ENST00000314045 NAT2P11245 290 aa11.73□□□□□ -0.53
DDX54-202ENST00000314045 RCC1P18754 421 aaPredicted RBP11.73□□□□□ -0.53
DDX54-202ENST00000314045 S100A2P29034 98 aa11.73□□□□□ -0.53
DDX54-202ENST00000314045 CEBPDP49716 269 aaPredicted RBP11.73□□□□□ -0.53
DDX54-202ENST00000314045 ASCL1P50553 236 aa11.73□□□□□ -0.53
DDX54-202ENST00000314045 POLR2GP62487 172 aaKnown RBP eCLIP11.73□□□□□ -0.53
DDX54-202ENST00000314045 RPUSD3Q6P087 351 aaKnown RBP11.73□□□□□ -0.53
DDX54-202ENST00000314045 LCN15Q6UWW0 184 aa11.73□□□□□ -0.53
DDX54-202ENST00000314045 SEZ6L2Q6UXD5 910 aa11.73□□□□□ -0.53
DDX54-202ENST00000314045 FGFBP3Q8TAT2 258 aa11.73□□□□□ -0.53
DDX54-202ENST00000314045 TMEM171Q8WVE6 324 aa11.73□□□□□ -0.53
DDX54-202ENST00000314045 SDHCQ99643 169 aaPredicted RBP11.73□□□□□ -0.53
DDX54-202ENST00000314045 GHITMQ9H3K2 345 aa11.73□□□□□ -0.53
DDX54-202ENST00000314045 CENPFP49454 3210 aa11.73□□□□□ -0.53
DDX54-202ENST00000314045 SNAPINO95295 136 aa11.73□□□□□ -0.53
DDX54-202ENST00000314045 CRYZL1O95825 349 aa11.73□□□□□ -0.53
DDX54-202ENST00000314045 VSIG10L2P0DP72 767 aa11.73□□□□□ -0.53
DDX54-202ENST00000314045 MPV17P39210 176 aa11.73□□□□□ -0.53
DDX54-202ENST00000314045 B3GALT5-AS1P59052 145 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms