RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 DCAF12L2Q5VW00 463 aa12.01□□□□□ -0.49
CLCN6-201ENST00000312413 RNF133Q8WVZ7 376 aa12.01□□□□□ -0.49
CLCN6-201ENST00000312413 MRGPRX3Q96LB0 322 aa12.01□□□□□ -0.49
CLCN6-201ENST00000312413 GABRG3Q99928 467 aa12.01□□□□□ -0.49
CLCN6-201ENST00000312413 SF3B5Q9BWJ5 86 aaKnown RBP12.01□□□□□ -0.49
CLCN6-201ENST00000312413 ZNF256Q9Y2P7 627 aaPredicted RBP12.01□□□□□ -0.49
CLCN6-201ENST00000312413 M0R3E3 92 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 VSIG10L2P0DP72 767 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 NMUP48645 174 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 MMP16P51512 607 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 SLC23A3Q6PIS1 610 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 OR4B1Q8NGF8 309 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 GPBAR1Q8TDU6 330 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 ABHD3Q8WU67 409 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 TMEM38BQ9NVV0 291 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 ST6GALNAC2Q9UJ37 374 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 TTC3P53804 2025 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 CA11O75493 328 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 ZNF660Q6AZW8 331 aaPredicted RBP12□□□□□ -0.49
CLCN6-201ENST00000312413 IL19Q9UHD0 177 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 FER1L6Q2WGJ9 1857 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 IGHV1OR21-1A0A087WYE8 117 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 OR4C46A6NHA9 309 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 MMP9P14780 707 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 COMPP49747 757 aaPredicted RBP12□□□□□ -0.49
CLCN6-201ENST00000312413 TMEM108Q6UXF1 575 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 SSX8Q7RTT4 187 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 RASL11BQ9BPW5 248 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 GPR61Q9BZJ8 451 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 CLEC1BQ9P126 229 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 ERVH48-1M5A8F1 160 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 SCGB1A1P11684 91 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 CARFQ8N187 725 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 C10orf111Q8N326 155 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 OR1K1Q8NGR3 316 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 TMEM204Q9BSN7 226 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 SLC26A1Q9H2B4 701 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 CDC42EP3Q9UKI2 254 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 KLK13Q9UKR3 277 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 DDTP30046 118 aa12□□□□□ -0.49
CLCN6-201ENST00000312413 SMAD4Q13485 552 aaKnown RBP12□□□□□ -0.49
CLCN6-201ENST00000312413 SNRNP40Q96DI7 357 aaKnown RBP12□□□□□ -0.49
CLCN6-201ENST00000312413 PSG2P11465 335 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 C12orf54Q6X4T0 127 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 OR8I2Q8N0Y5 310 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 CHST5Q9GZS9 411 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 AKIRIN1Q9H9L7 192 aaPredicted RBP11.99□□□□□ -0.49
CLCN6-201ENST00000312413 FAM157AC9JC47 383 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 J3QT63 122 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 CDIPTO14735 213 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 PPIHO43447 177 aaKnown RBP11.99□□□□□ -0.49
CLCN6-201ENST00000312413 HOXC4P09017 264 aaPredicted RBP11.99□□□□□ -0.49
CLCN6-201ENST00000312413 HIST1H1BP16401 226 aaKnown RBP11.99□□□□□ -0.49
CLCN6-201ENST00000312413 HINT1P49773 126 aaPredicted RBP11.99□□□□□ -0.49
CLCN6-201ENST00000312413 PLP1P60201 277 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 PIGYQ3MUY2 71 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 PGLYRP3Q96LB9 341 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 NUP214P35658 2090 aaPredicted RBP11.99□□□□□ -0.49
CLCN6-201ENST00000312413 NPIPB8E9PQR5 432 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 RPL36A-HNRNPH2H7BZ11 118 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 LGALS7P47929 136 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 WDR31Q8NA23 367 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 ADAMTS17Q8TE56 1095 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 Q8WTZ3 238 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 COX14Q96I36 57 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 TRAV38-1A0A0B4J264 116 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 CLDN18P56856 261 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 PIPOXQ9P0Z9 390 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 F5P12259 2224 aa11.99□□□□□ -0.49
CLCN6-201ENST00000312413 HSPB1P04792 205 aaKnown RBP11.98□□□□□ -0.49
CLCN6-201ENST00000312413 FABP2P12104 132 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 CEBPDP49716 269 aaPredicted RBP11.98□□□□□ -0.49
CLCN6-201ENST00000312413 RUNX1Q01196 453 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 SPATA45Q537H7 98 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 GMPPAQ96IJ6 420 aaPredicted RBP11.98□□□□□ -0.49
CLCN6-201ENST00000312413 PMCHL1Q16048 86 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 GUSBP11Q6P575 273 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 Q6ZS52 159 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 OR1P1Q8NH06 330 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 LAMA4Q16363 1823 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 KCNAB3O43448 404 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 MS4A3Q96HJ5 214 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 TUBD1Q9UJT1 453 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 NHSQ6T4R5 1651 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 EVPLQ92817 2033 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 CD1AP06126 327 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 AESQ08117 197 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 VAX1Q5SQQ9 334 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 LINC00518Q8N0U6 118 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 FAM60AQ9NP50 221 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 OR5AC2Q9NZP5 309 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 UQCR10Q9UDW1 63 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 CES1P1Q9UKY3 287 aa11.98□□□□□ -0.49
CLCN6-201ENST00000312413 CISD3P0C7P0 127 aa11.97□□□□□ -0.49
CLCN6-201ENST00000312413 TUSC5Q8IXB3 177 aa11.97□□□□□ -0.49
CLCN6-201ENST00000312413 CADM4Q8NFZ8 388 aa11.97□□□□□ -0.49
CLCN6-201ENST00000312413 PARD6GQ9BYG4 376 aaPredicted RBP11.97□□□□□ -0.49
CLCN6-201ENST00000312413 ASCL3Q9NQ33 180 aa11.97□□□□□ -0.49
CLCN6-201ENST00000312413 MAST2Q6P0Q8 1798 aa11.97□□□□□ -0.49
CLCN6-201ENST00000312413 COL22A1Q8NFW1 1626 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms