RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 DCAF12Q5T6F0 453 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 LIAT1Q6ZQX7 453 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 OSR2Q8N2R0 312 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 Q8WTZ3 238 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 TRAPPC2LQ9UL33 140 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 NCOR2Q9Y618 2525 aa10.98□□□□□ -0.65
RETREG3-201ENST00000309428 WIPF3A6NGB9 483 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 ZNF729A6NN14 1252 aaPredicted RBP10.97□□□□□ -0.65
RETREG3-201ENST00000309428 KRASP01116 189 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 CTSDP07339 412 aaPredicted RBP10.97□□□□□ -0.65
RETREG3-201ENST00000309428 SEC11BP0C7V7 166 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 SUPT4H1P63272 117 aaKnown RBP10.97□□□□□ -0.65
RETREG3-201ENST00000309428 FAM3AP98173 230 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 HOXA4Q00056 320 aaPredicted RBP10.97□□□□□ -0.65
RETREG3-201ENST00000309428 MST1LQ2TV78 715 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 DEGS2Q6QHC5 323 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 FGFBP3Q8TAT2 258 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 TMEM204Q9BSN7 226 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 SPG11Q96JI7 2443 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 OR6C6A6NF89 314 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 CNEP1R1Q8N9A8 125 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 DNASE2BQ8WZ79 361 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 EXTL1Q92935 676 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 NINJ1Q92982 152 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 TINAGQ9UJW2 476 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 CHCHD2Q9Y6H1 151 aaPredicted RBP10.97□□□□□ -0.65
RETREG3-201ENST00000309428 ARHGAP21Q5T5U3 1957 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 FSTP19883 344 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 PSMB3P49720 205 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 GPM6AP51674 278 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 VAX1Q5SQQ9 334 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 ARFGEF3Q5TH69 2177 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 BTNL8Q6UX41 500 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 TBC1D26Q86UD7 250 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 GAPTQ8N292 157 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 CCL28Q9NRJ3 127 aa10.97□□□□□ -0.65
RETREG3-201ENST00000309428 UBE2CO00762 179 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 DHRS3O75911 302 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 UMODP07911 640 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 FCGR3AP08637 254 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 EGR1P18146 543 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 NTF3P20783 257 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 GPX4P36969 197 aaPredicted RBP10.96□□□□□ -0.65
RETREG3-201ENST00000309428 TMEM18Q96B42 140 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 ARV1Q9H2C2 271 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 SLC7A10Q9NS82 523 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 IL36RNQ9UBH0 155 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 TMEM14DPA8MWL7 114 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 CXCL1P09341 107 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 SUCLG1P53597 346 aaKnown RBP10.96□□□□□ -0.65
RETREG3-201ENST00000309428 PCOLCEQ15113 449 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 RTL6Q6ICC9 239 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 TMEM252Q8N6L7 170 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 ELOVL1Q9BW60 279 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 GPR27Q9NS67 375 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 PSENENQ9NZ42 101 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 ERRFI1Q9UJM3 462 aaPredicted RBP10.96□□□□□ -0.65
RETREG3-201ENST00000309428 POMT1Q9Y6A1 747 aa10.96□□□□□ -0.65
RETREG3-201ENST00000309428 MAP1LC3B2A6NCE7 125 aa10.96□□□□□ -0.66
RETREG3-201ENST00000309428 F8VVB4 439 aa10.96□□□□□ -0.66
RETREG3-201ENST00000309428 F8VWA3 439 aa10.96□□□□□ -0.66
RETREG3-201ENST00000309428 DANCRP0C864 163 aa10.96□□□□□ -0.66
RETREG3-201ENST00000309428 PLP2Q04941 152 aa10.96□□□□□ -0.66
RETREG3-201ENST00000309428 ZNF441Q8N8Z8 693 aa10.96□□□□□ -0.66
RETREG3-201ENST00000309428 TXN2Q99757 166 aa10.96□□□□□ -0.66
RETREG3-201ENST00000309428 MAP1LC3BQ9GZQ8 125 aa10.96□□□□□ -0.66
RETREG3-201ENST00000309428 CACNG5Q9UF02 275 aa10.96□□□□□ -0.66
RETREG3-201ENST00000309428 TLN1Q9Y490 2541 aaKnown RBP10.96□□□□□ -0.66
RETREG3-201ENST00000309428 CRYAAP02489 173 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 PAX6P26367 422 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 MAGEA5P43359 124 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 GALR1P47211 349 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 FAM3BP58499 235 aaPredicted RBP10.95□□□□□ -0.66
RETREG3-201ENST00000309428 KRTDAPP60985 99 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 SSTP61278 116 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 HBG1P69891 147 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 HBG2P69892 147 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 CTAG1AP78358 180 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 OR51I2Q9H344 312 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 MOB1AQ9H8S9 216 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 SH3BGRL2Q9UJC5 107 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 PAM16Q9Y3D7 125 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 TNRC18O15417 2968 aaPredicted RBP10.95□□□□□ -0.66
RETREG3-201ENST00000309428 ARGFXA6NJG6 315 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 PKIAP61925 76 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 BTF3L4Q96K17 158 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 FOXB1Q99853 325 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 WFDC1Q9HC57 220 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 SIRPB1O00241 398 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 PTBP3O95758 552 aaKnown RBP10.95□□□□□ -0.66
RETREG3-201ENST00000309428 PPYP01298 95 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 NPBWR2P48146 333 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 ALKBH6Q3KRA9 238 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 FAM78BQ5VT40 261 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 PMS2CLQ68D20 193 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 C17orf82Q86X59 251 aaPredicted RBP10.95□□□□□ -0.66
RETREG3-201ENST00000309428 TUSC5Q8IXB3 177 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 TMED3Q9Y3Q3 217 aa10.95□□□□□ -0.66
RETREG3-201ENST00000309428 DMXL2Q8TDJ6 3036 aa10.94□□□□□ -0.66
RETREG3-201ENST00000309428 AQP7P3A6NL99 342 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms