RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 SRFP11831 508 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 CLDN15P56746 228 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 SRPXP78539 464 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 PRDX4Q13162 271 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 KCNMB1Q16558 191 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 PACRGQ96M98 296 aaPredicted RBP12.74□□□□□ -0.37
RUNX3-201ENST00000308873 SMIM7Q9BQ49 75 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 ANGPTL4Q9BY76 406 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 VDAC1P21796 283 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 CLN3Q13286 438 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 LPAL2Q16609 132 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 OR10J5Q8NHC4 309 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 HLA-CQ95604 372 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 LHX4Q969G2 390 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 OR2H1Q9GZK4 316 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 CHRNA10Q9GZZ6 450 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 SLC39A9Q9NUM3 307 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 NOSIPQ9Y314 301 aaKnown RBP12.74□□□□□ -0.37
RUNX3-201ENST00000308873 A0A087X0M5 115 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 A0A1B0GX30 115 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 OR5H1A6NKK0 313 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 SIRPB1O00241 398 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 SYNGR1O43759 233 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 PITX3O75364 302 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 HBE1P02100 147 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 LYPD6BQ8NI32 183 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 PLPPR2Q96GM1 343 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 SCRT1Q9BWW7 348 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 PLA2G3Q9NZ20 509 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 PSENENQ9NZ42 101 aa12.74□□□□□ -0.37
RUNX3-201ENST00000308873 TPRP12270 2363 aaKnown RBP12.74□□□□□ -0.37
RUNX3-201ENST00000308873 SLC22A20A6NK97 555 aa12.73□□□□□ -0.37
RUNX3-201ENST00000308873 SYNGR3O43761 229 aa12.73□□□□□ -0.37
RUNX3-201ENST00000308873 SUCLG1P53597 346 aaKnown RBP12.73□□□□□ -0.37
RUNX3-201ENST00000308873 RAC1P63000 192 aa12.73□□□□□ -0.37
RUNX3-201ENST00000308873 ZNF808Q8N4W9 903 aaPredicted RBP12.73□□□□□ -0.37
RUNX3-201ENST00000308873 SLC25A22Q9H936 323 aa12.73□□□□□ -0.37
RUNX3-201ENST00000308873 MRPS17Q9Y2R5 130 aaKnown RBP12.73□□□□□ -0.37
RUNX3-201ENST00000308873 DMRT1Q9Y5R6 373 aa12.73□□□□□ -0.37
RUNX3-201ENST00000308873 CACNA1GO43497 2377 aa12.73□□□□□ -0.37
RUNX3-201ENST00000308873 SEC14L6B5MCN3 397 aa12.73□□□□□ -0.37
RUNX3-201ENST00000308873 DEFA4P12838 97 aa12.73□□□□□ -0.37
RUNX3-201ENST00000308873 SDSLQ96GA7 329 aa12.73□□□□□ -0.37
RUNX3-201ENST00000308873 A0A0G2JRQ6 117 aa12.73□□□□□ -0.37
RUNX3-201ENST00000308873 SLC25A53Q5H9E4 307 aa12.73□□□□□ -0.37
RUNX3-201ENST00000308873 C10orf128Q5T292 105 aa12.73□□□□□ -0.37
RUNX3-201ENST00000308873 TMEM54Q969K7 222 aa12.73□□□□□ -0.37
RUNX3-201ENST00000308873 WNT5BQ9H1J7 359 aa12.73□□□□□ -0.37
RUNX3-201ENST00000308873 IFITM10A6NMD0 228 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 CLDN34H7C241 214 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 PPIHO43447 177 aaKnown RBP12.72□□□□□ -0.37
RUNX3-201ENST00000308873 CYTIPO60759 359 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 CBR3O75828 277 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 NGFP01138 241 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 GPX4P36969 197 aaPredicted RBP12.72□□□□□ -0.37
RUNX3-201ENST00000308873 LTC4SQ16873 150 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 SNIP1Q8TAD8 396 aaKnown RBP12.72□□□□□ -0.37
RUNX3-201ENST00000308873 ATP5SQ99766 215 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 FOXD3Q9UJU5 478 aaPredicted RBP12.72□□□□□ -0.37
RUNX3-201ENST00000308873 TRAPPC2LQ9UL33 140 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 WASF3Q9UPY6 502 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 NBEAQ8NFP9 2946 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 OR6C6A6NF89 314 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 MMP7P09237 267 aaPredicted RBP12.72□□□□□ -0.37
RUNX3-201ENST00000308873 ARF1P84077 181 aaKnown RBP12.72□□□□□ -0.37
RUNX3-201ENST00000308873 RTP5Q14D33 572 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 Q6ZPA2 131 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 CADM4Q8NFZ8 388 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 THOC3Q96J01 351 aaKnown RBP12.72□□□□□ -0.37
RUNX3-201ENST00000308873 C12orf49Q9H741 205 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 ARGFXA6NJG6 315 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 ZNF729A6NN14 1252 aaPredicted RBP12.72□□□□□ -0.37
RUNX3-201ENST00000308873 FAM166BA8MTA8 275 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 KRASP01116 189 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 HNF1AP20823 631 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 H3F3AP84243 136 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 UNQ6494/PRO21346Q6UXR6 183 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 GPR146Q96CH1 333 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 TREM2Q9NZC2 230 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 CRIM1Q9NZV1 1036 aa12.72□□□□□ -0.37
RUNX3-201ENST00000308873 GJE1A6NN92 205 aa12.71□□□□□ -0.37
RUNX3-201ENST00000308873 CTSSP25774 331 aa12.71□□□□□ -0.37
RUNX3-201ENST00000308873 FOXG1P55316 489 aaPredicted RBP12.71□□□□□ -0.37
RUNX3-201ENST00000308873 TMEM211Q6ICI0 200 aa12.71□□□□□ -0.37
RUNX3-201ENST00000308873 CLDND2Q8NHS1 167 aa12.71□□□□□ -0.37
RUNX3-201ENST00000308873 OR5B12Q96R08 314 aa12.71□□□□□ -0.37
RUNX3-201ENST00000308873 ARV1Q9H2C2 271 aa12.71□□□□□ -0.37
RUNX3-201ENST00000308873 OR1A1Q9P1Q5 309 aa12.71□□□□□ -0.37
RUNX3-201ENST00000308873 PRR14LQ5THK1 2151 aa12.71□□□□□ -0.37
RUNX3-201ENST00000308873 RAC3P60763 192 aa12.71□□□□□ -0.37
RUNX3-201ENST00000308873 PCOLCEQ15113 449 aa12.71□□□□□ -0.37
RUNX3-201ENST00000308873 C3AR1Q16581 482 aa12.71□□□□□ -0.37
RUNX3-201ENST00000308873 ZNF66Q6ZN08 573 aa12.71□□□□□ -0.37
RUNX3-201ENST00000308873 CPEB3Q8NE35 698 aaKnown RBP12.71□□□□□ -0.37
RUNX3-201ENST00000308873 CA5BP1Q8WTZ4 195 aa12.71□□□□□ -0.37
RUNX3-201ENST00000308873 ROS1P08922 2347 aa12.71□□□□□ -0.37
RUNX3-201ENST00000308873 CD55P08174 381 aa12.71□□□□□ -0.38
RUNX3-201ENST00000308873 PAX6P26367 422 aa12.71□□□□□ -0.38
RUNX3-201ENST00000308873 TAS2R30P59541 319 aa12.71□□□□□ -0.38
RUNX3-201ENST00000308873 FADS6Q8N9I5 356 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms