RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 TRDCB7Z8K6 153 aa18.93■□□□□ 0.62
PDLIM2-202ENST00000308354 SH2D1BO14796 132 aa18.93■□□□□ 0.62
PDLIM2-202ENST00000308354 SPRY3O43610 288 aa18.93■□□□□ 0.62
PDLIM2-202ENST00000308354 HAND1O96004 215 aa18.93■□□□□ 0.62
PDLIM2-202ENST00000308354 SNTB1Q13884 538 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-202ENST00000308354 SRSF7Q16629 238 aaKnown RBP eCLIP18.93■□□□□ 0.62
PDLIM2-202ENST00000308354 ZCCHC14Q8WYQ9 949 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-202ENST00000308354 VKORC1Q9BQB6 163 aa18.93■□□□□ 0.62
PDLIM2-202ENST00000308354 RASL12Q9NYN1 266 aa18.93■□□□□ 0.62
PDLIM2-202ENST00000308354 CHD3Q12873 2000 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-202ENST00000308354 MFSD2BA6NFX1 497 aa18.93■□□□□ 0.62
PDLIM2-202ENST00000308354 IFNA21P01568 189 aa18.93■□□□□ 0.62
PDLIM2-202ENST00000308354 PET100P0DJ07 73 aa18.93■□□□□ 0.62
PDLIM2-202ENST00000308354 UNQ6494/PRO21346Q6UXR6 183 aa18.93■□□□□ 0.62
PDLIM2-202ENST00000308354 MARVELD3Q96A59 401 aa18.93■□□□□ 0.62
PDLIM2-202ENST00000308354 PSPNO60542 156 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 PTBP3O95758 552 aaKnown RBP18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 TK1P04183 234 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 ANGPTL6Q8NI99 470 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 UBALD1Q8TB05 177 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 SLC25A32Q9H2D1 315 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 MED9Q9NWA0 146 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 TAAR3PQ9P1P4 343 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 ITPR1Q14643 2758 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 A0A1B0GWJ7 208 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 DPRXA6NFQ7 191 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 ABCD4O14678 606 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 SPIN3Q5JUX0 258 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 TMEM108Q6UXF1 575 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 ACP7Q6ZNF0 438 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 CCDC28AQ8IWP9 274 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 PRR18Q8N4B5 295 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 LRRC29Q8WV35 223 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 OR2V2Q96R30 315 aa18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 RIMS4Q9H426 269 aaPredicted RBP18.92■□□□□ 0.62
PDLIM2-202ENST00000308354 ROS1P08922 2347 aa18.91■□□□□ 0.62
PDLIM2-202ENST00000308354 KIR2DS1A0A191URI9 304 aa18.91■□□□□ 0.62
PDLIM2-202ENST00000308354 KIR2DS4P43632 304 aa18.91■□□□□ 0.62
PDLIM2-202ENST00000308354 LY6DQ14210 128 aa18.91■□□□□ 0.62
PDLIM2-202ENST00000308354 KIR2DS1Q14954 304 aa18.91■□□□□ 0.62
PDLIM2-202ENST00000308354 LYZL2Q7Z4W2 148 aa18.91■□□□□ 0.62
PDLIM2-202ENST00000308354 GLYATL2Q8WU03 294 aa18.91■□□□□ 0.62
PDLIM2-202ENST00000308354 SUCNR1Q9BXA5 334 aa18.91■□□□□ 0.62
PDLIM2-202ENST00000308354 PFDN2Q9UHV9 154 aa18.91■□□□□ 0.62
PDLIM2-202ENST00000308354 IGLV3-9A0A075B6K5 115 aa18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 PHF1O43189 567 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 GLAP06280 429 aa18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 ACAA1P09110 424 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 GNRHRP30968 328 aa18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 NUP62P37198 522 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 LIAT1Q6ZQX7 453 aa18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 BOLLQ8N9W6 283 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 SECTM1Q8WVN6 248 aa18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 IL1F10Q8WWZ1 152 aa18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 PHYHIPLQ96FC7 376 aa18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 AQP10Q96PS8 301 aa18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 DIRAS3O95661 229 aa18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 BSPH1Q075Z2 132 aa18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 FIP1L1Q6UN15 594 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 CCDC71LQ8N9Z2 235 aa18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 MSI2Q96DH6 328 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 KIRREL1Q96J84 757 aa18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 CNTNAP3BQ96NU0 1288 aa18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 WFIKKN1Q96NZ8 548 aa18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 TP53RKQ96S44 253 aa18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 CNTNAP3Q9BZ76 1288 aa18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 METRNQ9UJH8 293 aa18.9■□□□□ 0.62
PDLIM2-202ENST00000308354 TPRP12270 2363 aaKnown RBP18.89■□□□□ 0.62
PDLIM2-202ENST00000308354 EGR1P18146 543 aa18.89■□□□□ 0.61
PDLIM2-202ENST00000308354 ZNF497Q6ZNH5 498 aa18.89■□□□□ 0.61
PDLIM2-202ENST00000308354 LRTM2Q8N967 370 aa18.89■□□□□ 0.61
PDLIM2-202ENST00000308354 LHFPL5Q8TAF8 219 aa18.89■□□□□ 0.61
PDLIM2-202ENST00000308354 CYTL1Q9NRR1 136 aa18.89■□□□□ 0.61
PDLIM2-202ENST00000308354 TRAPPC2LQ9UL33 140 aa18.89■□□□□ 0.61
PDLIM2-202ENST00000308354 IGKV1D-13A0A0B4J2D9 117 aa18.89■□□□□ 0.61
PDLIM2-202ENST00000308354 IGKV1-13P0DP09 117 aa18.89■□□□□ 0.61
PDLIM2-202ENST00000308354 ZNF880Q6PDB4 577 aa18.89■□□□□ 0.61
PDLIM2-202ENST00000308354 STOML3Q8TAV4 291 aa18.89■□□□□ 0.61
PDLIM2-202ENST00000308354 C18orf12Q96KH6 178 aa18.89■□□□□ 0.61
PDLIM2-202ENST00000308354 USB1Q9BQ65 265 aaKnown RBP18.89■□□□□ 0.61
PDLIM2-202ENST00000308354 COL6A6A6NMZ7 2263 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 TRBV6-6A0A0A6YYG2 114 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 MPPED1O15442 326 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 SCGB1D2O95969 90 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 CD200P41217 278 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 KCNJ3P48549 501 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 CASP6P55212 293 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 RPS23P62266 143 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 PCSK4Q6UW60 755 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 MOGAT3Q86VF5 341 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 GPHA2Q96T91 129 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 KIAA2026Q5HYC2 2103 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 PTAFRP25105 342 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 HLA-DRB3P79483 266 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 ZNF818PQ6ZRF7 136 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 ITLN1Q8WWA0 313 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 MEGF10Q96KG7 1140 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 SHARPINQ9H0F6 387 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 DNAJB11Q9UBS4 358 aa18.88■□□□□ 0.61
PDLIM2-202ENST00000308354 LSM5Q9Y4Y9 91 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms