RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 NPIPB11E5RHQ5 1161 aa9.99□□□□□ -0.81
TRIM40-205ENST00000307859 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.99□□□□□ -0.81
TRIM40-205ENST00000307859 CCL21O00585 134 aa9.99□□□□□ -0.81
TRIM40-205ENST00000307859 PSPNO60542 156 aa9.99□□□□□ -0.81
TRIM40-205ENST00000307859 IFNA2P01563 188 aa9.99□□□□□ -0.81
TRIM40-205ENST00000307859 RCC1P18754 421 aaPredicted RBP9.99□□□□□ -0.81
TRIM40-205ENST00000307859 CHRNB4P30926 498 aa9.99□□□□□ -0.81
TRIM40-205ENST00000307859 KCNJ3P48549 501 aa9.99□□□□□ -0.81
TRIM40-205ENST00000307859 CEBPDP49716 269 aaPredicted RBP9.99□□□□□ -0.81
TRIM40-205ENST00000307859 PIGPP57054 158 aa9.99□□□□□ -0.81
TRIM40-205ENST00000307859 FXYD4P59646 89 aa9.99□□□□□ -0.81
TRIM40-205ENST00000307859 C5orf24Q7Z6I8 188 aa9.99□□□□□ -0.81
TRIM40-205ENST00000307859 SGPP2Q8IWX5 399 aa9.99□□□□□ -0.81
TRIM40-205ENST00000307859 WFIKKN1Q96NZ8 548 aa9.99□□□□□ -0.81
TRIM40-205ENST00000307859 NGBQ9NPG2 151 aa9.99□□□□□ -0.81
TRIM40-205ENST00000307859 SLC2A9Q9NRM0 540 aa9.99□□□□□ -0.81
TRIM40-205ENST00000307859 OR14J1Q9UGF5 321 aa9.99□□□□□ -0.81
TRIM40-205ENST00000307859 ZDHHC8Q9ULC8 765 aa9.99□□□□□ -0.81
TRIM40-205ENST00000307859 PCDHB10Q9UN67 800 aa9.99□□□□□ -0.81
TRIM40-205ENST00000307859 TRBV6-7A0A0A0MS04 114 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 RFPL4AA6NLU0 287 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 RFPL4AL1F8VTS6 287 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 SPRY3O43610 288 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 DIRAS3O95661 229 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 IGHV1-46P01743 117 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 EGR1P18146 543 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 ZNF81P51508 661 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 HOXA4Q00056 320 aaPredicted RBP9.98□□□□□ -0.81
TRIM40-205ENST00000307859 SORDQ00796 357 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 PAX5Q02548 391 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 FGL1Q08830 312 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 ATXN7L3Q14CW9 347 aaPredicted RBP9.98□□□□□ -0.81
TRIM40-205ENST00000307859 HMGN3Q15651 99 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 SPRNQ5BIV9 151 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 ITLN1Q8WWA0 313 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 GALNT14Q96FL9 552 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 PDCD10Q9BUL8 212 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 NAA60Q9H7X0 242 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 LRBAP50851 2863 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 SETD2Q9BYW2 2564 aaPredicted RBP9.98□□□□□ -0.81
TRIM40-205ENST00000307859 ARFGEF3Q5TH69 2177 aa9.98□□□□□ -0.81
TRIM40-205ENST00000307859 CENPEQ02224 2701 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 TEX13DA0A0J9YY54 714 aaPredicted RBP9.97□□□□□ -0.81
TRIM40-205ENST00000307859 TMEM30CPA0ZSE6 113 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 BET1O15155 118 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 LHBP01229 141 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 ADH4P08319 380 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 CXCL2P19875 107 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 SERPINF1P36955 418 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 RBMXP38159 391 aaKnown RBP9.97□□□□□ -0.81
TRIM40-205ENST00000307859 OR3A1P47881 315 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 RND3P61587 244 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 ADIPOQQ15848 244 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 ABCA11PQ4W5N1 156 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 SLC35E4Q6ICL7 350 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 GSG1LQ6UXU4 331 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 MOGAT3Q86VF5 341 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 H1FOOQ8IZA3 346 aaPredicted RBP9.97□□□□□ -0.81
TRIM40-205ENST00000307859 FAM185AQ8N0U4 392 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 GCSAMQ8N6F7 178 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 CCDC71LQ8N9Z2 235 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 OR5T2Q8NGG2 359 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 RTN4IP1Q8WWV3 396 aaPredicted RBP9.97□□□□□ -0.81
TRIM40-205ENST00000307859 RNASE6Q93091 150 aaKnown RBP9.97□□□□□ -0.81
TRIM40-205ENST00000307859 NMES1Q9C002 83 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 HEXA-AS1Q9H8Q6 139 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 PRR13Q9NZ81 148 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 IL19Q9UHD0 177 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 TRAPPC2LQ9UL33 140 aa9.97□□□□□ -0.81
TRIM40-205ENST00000307859 DIDO1Q9BTC0 2240 aaKnown RBP9.97□□□□□ -0.81
TRIM40-205ENST00000307859 SLC25A4P12235 298 aa9.96□□□□□ -0.81
TRIM40-205ENST00000307859 ADORA2A-AS1P86434 159 aa9.96□□□□□ -0.81
TRIM40-205ENST00000307859 COL10A1Q03692 680 aa9.96□□□□□ -0.81
TRIM40-205ENST00000307859 NCMAPQ5T1S8 102 aa9.96□□□□□ -0.81
TRIM40-205ENST00000307859 LDLRAD3Q86YD5 345 aa9.96□□□□□ -0.81
TRIM40-205ENST00000307859 CD177Q8N6Q3 437 aa9.96□□□□□ -0.81
TRIM40-205ENST00000307859 COQ2Q96H96 371 aa9.96□□□□□ -0.81
TRIM40-205ENST00000307859 SEC22AQ96IW7 307 aa9.96□□□□□ -0.81
TRIM40-205ENST00000307859 KIRREL1Q96J84 757 aa9.96□□□□□ -0.81
TRIM40-205ENST00000307859 COMMD9Q9P000 198 aa9.96□□□□□ -0.81
TRIM40-205ENST00000307859 IGKV1D-17A0A075B6S4 117 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 FXYD6-FXYD2A0A087WZ82 144 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 IGKV1D-13A0A0B4J2D9 117 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 FAM25EA8MYX2 175 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 SHISA9B4DS77 424 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 ADAP1O75689 374 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 CD55P08174 381 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 OR4A8P0C604 315 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 IGKV1-13P0DP09 117 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 PSG2P11465 335 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 RPA2P15927 270 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 C4BPBP20851 252 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 TNFSF4P23510 183 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 GNRHRP30968 328 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 TNFAIP6P98066 277 aaPredicted RBP9.96□□□□□ -0.82
TRIM40-205ENST00000307859 CYCSP99999 105 aaKnown RBP9.96□□□□□ -0.82
TRIM40-205ENST00000307859 TMEM187Q14656 261 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 PHLDA2Q53GA4 152 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 ADAM5Q6NVV9 412 aa9.96□□□□□ -0.82
TRIM40-205ENST00000307859 TMEM65Q6PI78 240 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms