RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 NPIPB8E9PQR5 432 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 PPP1CCP36873 323 aaKnown RBP9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 CRYBB2P43320 205 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 SMIM4Q8WVI0 70 aa9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 RPUSD4Q96CM3 377 aaKnown RBP9.28□□□□□ -0.92
SYNPO2-201ENST00000307142 SLC38A11Q08AI6 406 aa9.27□□□□□ -0.92
SYNPO2-201ENST00000307142 RPUSD3Q6P087 351 aaKnown RBP9.27□□□□□ -0.92
SYNPO2-201ENST00000307142 SVBPQ8N300 66 aa9.27□□□□□ -0.92
SYNPO2-201ENST00000307142 FAM210AQ96ND0 272 aa9.27□□□□□ -0.92
SYNPO2-201ENST00000307142 GAMTQ14353 236 aa9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 SLC25A47Q6Q0C1 308 aa9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 NFAM1Q8NET5 270 aaPredicted RBP9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 PPP1R1CQ8WVI7 109 aa9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 ASAH1Q13510 395 aa9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 PXDC1Q5TGL8 231 aa9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 ZDHHC22Q8N966 263 aa9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 APCDD1LQ8NCL9 501 aa9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 ESPL1Q14674 2120 aa9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 SYNGR1O43759 233 aa9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 CD40P25942 277 aa9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 BTNL8Q6UX41 500 aa9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 CHRDL1Q9BU40 450 aa9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 A0A0U1RQV5 110 aa9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 ZNRF4Q8WWF5 429 aa9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 KIF26AQ9ULI4 1882 aaPredicted RBP9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 MYO7BQ6PIF6 2116 aa9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 TMEM41BQ5BJD5 291 aa9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 NEU4Q8WWR8 484 aaPredicted RBP9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 PATZ1Q9HBE1 687 aaKnown RBP9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 ZMIZ1Q9ULJ6 1067 aa9.27□□□□□ -0.93
SYNPO2-201ENST00000307142 HEATR5BQ9P2D3 2071 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 RPL36A-HNRNPH2H7BZ11 118 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 TGFAP01135 160 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 IGHA1P01876 353 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 IGKV3-11P04433 115 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 G6PCP35575 357 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 LSM11P83369 360 aaKnown RBP eCLIP9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 SSBP3Q9BWW4 388 aaPredicted RBP9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 SCN8AQ9UQD0 1980 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 GALP22466 123 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 CDKN1AP38936 164 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 TFPI2P48307 235 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 MGAT2Q10469 447 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 TOR2AQ5JU69 321 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 METTL1Q9UBP6 276 aaKnown RBP9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 KLHDC2Q9Y2U9 406 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 OGG1O15527 345 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 LIPFP07098 398 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 SPP1P10451 314 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 GABRB1P18505 474 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 NTN3O00634 580 aaPredicted RBP9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 LALBAP00709 142 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 ID1P41134 155 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 FAM209AQ5JX71 171 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 GAPTQ8N292 157 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 ZNF561Q8N587 486 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 OR4A4PQ8NGN8 299 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 ZNF629Q9UEG4 869 aaPredicted RBP9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 MT-ND4LP03901 98 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 RPS4Y1P22090 263 aaKnown RBP9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 RAB40CQ96S21 281 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 OR51I2Q9H344 312 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 ANXA10Q9UJ72 324 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 URGCP-MRPS24S4R325 110 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 C17orf51A8MQB3 221 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 MGST3O14880 152 aa9.26□□□□□ -0.93
SYNPO2-201ENST00000307142 CACNA1EQ15878 2313 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 C19orf67A6NJJ6 358 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 SNRPGP15A8MWD9 76 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 OR2H2O95918 312 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 CD200P41217 278 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 RBM11P57052 281 aaKnown RBP9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 C9orf106Q8NAJ2 232 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 MITD1Q8WV92 249 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 ATP5SQ99766 215 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 PRSS27Q9BQR3 290 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 CLCF1Q9UBD9 225 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 CYB5R1Q9UHQ9 305 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 OR51B2Q9Y5P1 312 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 MMP7P09237 267 aaPredicted RBP9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 HTR1DP28221 377 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 SNRNP40Q96DI7 357 aaKnown RBP9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 WDYHV1Q96HA8 205 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 BTF3L4Q96K17 158 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 SNX22Q96L94 193 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 ATPIF1Q9UII2 106 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 PRNDQ9UKY0 176 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 TMEM8BA6NDV4 472 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 ZNF716A6NP11 495 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 ADAM10O14672 748 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 ZG16O60844 167 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 MRPL14Q6P1L8 145 aaKnown RBP9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 SAV1Q9H4B6 383 aaPredicted RBP9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 NHLH1Q02575 133 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 FUT5Q11128 374 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 DMKNQ6E0U4 476 aaPredicted RBP9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 NCCRP1Q6ZVX7 275 aaPredicted RBP9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 IMMP1LQ96LU5 166 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 RALYQ9UKM9 306 aaKnown RBP9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 PTP4A3O75365 173 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms