RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 OR4F4Q96R69 305 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 TCEAL7Q9BRU2 100 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 TRAPPC2LQ9UL33 140 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 FZR1Q9UM11 496 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 LOC400499M0QZD8 3231 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 IGKV1-12A0A0C4DH73 117 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 A0A0G2JMM0 328 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 A0A1W2PPB8 328 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 A0A1W2PRS3 328 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 CRYM-AS1A6NIL9 109 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 KIR3DP1A8MWS1 328 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 SRSF10O75494 262 aaKnown RBP12.58□□□□□ -0.4
PTPN9-201ENST00000306726 IGKV1D-12P01611 117 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 DANCRP0C864 163 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 IL11RAQ14626 422 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 TMEM100Q9NV29 134 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 MUC3AQ02505 3323 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 IGHV3-43A0A0B4J1X8 118 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 B4E171 279 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 TSTD3H0UI37 97 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 CD5P06127 495 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 TRGC1P0CF51 173 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 IGHV3-43DP0DP04 118 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 TSPAN7P41732 249 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 CLN3Q13286 438 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 SSX2Q16385 188 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 MKXQ8IYA7 352 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 OR2M3Q8NG83 312 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 OR1F12Q8NHA8 337 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 EDARADDQ8WWZ3 215 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 ASB13Q8WXK3 278 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 OR51M1Q9H341 326 aa12.58□□□□□ -0.4
PTPN9-201ENST00000306726 C19orf25Q9UFG5 118 aaPredicted RBP12.58□□□□□ -0.4
PTPN9-201ENST00000306726 ADAMTS9Q9P2N4 1935 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 ARGFXA6NJG6 315 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 PSG2P11465 335 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 ZNF818PQ6ZRF7 136 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 OR6X1Q8NH79 312 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 CHST5Q9GZS9 411 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 BOD1L1Q8NFC6 3051 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 IGKV1D-13A0A0B4J2D9 117 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 BTBD17A6NE02 478 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 MRPL33O75394 65 aaKnown RBP12.57□□□□□ -0.4
PTPN9-201ENST00000306726 IGKV1-13P0DP09 117 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 NR2C1P13056 603 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 ZNF600Q6ZNG1 722 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 COMMD1Q8N668 190 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 TMEM171Q8WVE6 324 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 LOC390937A0A1W2PQ73 354 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 A0A1W2PQD3 144 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 A0A1W2PQM1 296 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 PQLC2LA1A4F0 135 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 NGFP01138 241 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 FOXG1P55316 489 aaPredicted RBP12.57□□□□□ -0.4
PTPN9-201ENST00000306726 CLDN15P56746 228 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 FAM3BP58499 235 aaPredicted RBP12.57□□□□□ -0.4
PTPN9-201ENST00000306726 PLGLB1Q02325 96 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 ZFP36L1Q07352 338 aaKnown RBP12.57□□□□□ -0.4
PTPN9-201ENST00000306726 TMEM187Q14656 261 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 SPINK14Q6IE38 97 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 BTNL3Q6UXE8 466 aa12.57□□□□□ -0.4
PTPN9-201ENST00000306726 IGHV5-10-1A0A0J9YXX1 117 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 A0A1W2PNV4 684 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 ZIC3O60481 467 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 CEBPDP49716 269 aaPredicted RBP12.56□□□□□ -0.4
PTPN9-201ENST00000306726 ZNF133P52736 654 aaPredicted RBP12.56□□□□□ -0.4
PTPN9-201ENST00000306726 RAB4BP61018 213 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 TRIP6Q15654 476 aaKnown RBP12.56□□□□□ -0.4
PTPN9-201ENST00000306726 KHDC3LQ587J8 217 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 FAM53AQ6NSI3 398 aaPredicted RBP12.56□□□□□ -0.4
PTPN9-201ENST00000306726 SLC25A47Q6Q0C1 308 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 PTX4Q96A99 478 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 OR5B12Q96R08 314 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 SRXN1Q9BYN0 137 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 SLC25A31Q9H0C2 315 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 PATZ1Q9HBE1 687 aaKnown RBP12.56□□□□□ -0.4
PTPN9-201ENST00000306726 SYNGR1O43759 233 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 TMEM127O75204 238 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 SOD3P08294 240 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 CYC1P08574 325 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 THBS4P35443 961 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 NHLH1Q02575 133 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 BAXQ07812 192 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 ZNF705AQ6ZN79 300 aaPredicted RBP12.56□□□□□ -0.4
PTPN9-201ENST00000306726 PP6455Q8WZ26 134 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 PACRGQ96M98 296 aaPredicted RBP12.56□□□□□ -0.4
PTPN9-201ENST00000306726 FOXB1Q99853 325 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 DCHS1Q96JQ0 3298 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 RFPL3SP0C7P2 107 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 RPS2P15880 293 aaKnown RBP12.56□□□□□ -0.4
PTPN9-201ENST00000306726 FUT3P21217 361 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 ARL6IP1Q15041 203 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 ZNF385CQ66K41 422 aaPredicted RBP12.56□□□□□ -0.4
PTPN9-201ENST00000306726 ZDHHC23Q8IYP9 409 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 MRPL13Q9BYD1 178 aaKnown RBP12.56□□□□□ -0.4
PTPN9-201ENST00000306726 MOB1AQ9H8S9 216 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 GLRX2Q9NS18 164 aa12.56□□□□□ -0.4
PTPN9-201ENST00000306726 IFNA10P01566 189 aa12.55□□□□□ -0.4
PTPN9-201ENST00000306726 CD55P08174 381 aa12.55□□□□□ -0.4
PTPN9-201ENST00000306726 CEACAM1P13688 526 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms