RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 KCNIP4Q6PIL6 250 aa9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 CISD2Q8N5K1 135 aaKnown RBP9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 OR1K1Q8NGR3 316 aa9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 TPPP3Q9BW30 176 aa9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 SLC35B3Q9H1N7 401 aa9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 OR5AC2Q9NZP5 309 aa9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 IAPPP10997 89 aa9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 ZNF787Q6DD87 383 aa9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 TMEM222Q9H0R3 208 aa9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 LAMA3Q16787 3333 aa9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 OOEPA6NGQ2 149 aa9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 COX5AP20674 150 aa9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 HOXD11P31277 338 aaPredicted RBP9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 LHFPL5Q8TAF8 219 aa9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 ERGIC1Q969X5 290 aa9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 PFDN5Q99471 154 aa9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 ACTR3CQ9C0K3 210 aaPredicted RBP9.42□□□□□ -0.9
PCDHGC4-201ENST00000306593 ZFP92A6NM28 416 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 MT-ND4LP03901 98 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 ATP6V1FQ16864 119 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 C2orf68Q2NKX9 166 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 PHYHD1Q5SRE7 291 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 RBMXL3Q8N7X1 1067 aaKnown RBP9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 CORO2AQ92828 525 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 SMDT1Q9H4I9 107 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 CCL28Q9NRJ3 127 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 OR2C1O95371 312 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 ZNF708P17019 499 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 POLR2GP62487 172 aaKnown RBP eCLIP9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 EWSR1Q01844 656 aaKnown RBP eCLIP9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 HAGHQ16775 308 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 C1QL2Q7Z5L3 287 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 C1orf87Q8N0U7 546 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 UBAC2Q8NBM4 344 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 DYRK2Q92630 601 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 ADGRG7Q96K78 797 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 ATP5SQ99766 215 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 RNF122Q9H9V4 155 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 PRDM6Q9NQX0 595 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 CACNG5Q9UF02 275 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 H0Y980 276 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 HAND1O96004 215 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 ZNF561Q8N587 486 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 IL22RA2Q969J5 263 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 OR10C1Q96KK4 312 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 UHRF2Q96PU4 802 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 MESP1Q9BRJ9 268 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 GNB4Q9HAV0 340 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 CACNA1AO00555 2505 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 SONP18583 2426 aaKnown RBP9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 IGKV1-9A0A0C4DH69 117 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 IL3RAP26951 378 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 LPAR6P43657 344 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 ACOT6Q3I5F7 207 aaPredicted RBP9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 CDCP2Q5VXM1 449 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 TMEM88Q6PEY1 159 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 FOXL2NBQ6ZUU3 175 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 VASH2Q86V25 355 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 BMPERQ8N8U9 685 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 LHX4Q969G2 390 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 ZDHHC16Q969W1 377 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 SOX7Q9BT81 388 aa9.41□□□□□ -0.9
PCDHGC4-201ENST00000306593 TRAV14DV4A0A0A6YYC5 116 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 LNP1A1A4G5 178 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 NKX2-6A6NCS4 301 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 ZNF716A6NP11 495 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 PITX3O75364 302 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 HKR1P10072 659 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 ELLP55199 621 aaPredicted RBP9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 LY6G6FQ5SQ64 297 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 DPPA3Q6W0C5 159 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 FAM214BQ7L5A3 538 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 FAM219AQ8IW50 185 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 GALNT14Q96FL9 552 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 S1PR3Q99500 378 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 WNK2Q9Y3S1 2297 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 SYNGR2O43760 224 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 KIR2DS2P43631 304 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 FAM209AQ5JX71 171 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 EIF4E3Q8N5X7 224 aaKnown RBP9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 LYZL4Q96KX0 146 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 HEXA-AS1Q9H8Q6 139 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 Q9N2K0 584 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 FOXJ2Q9P0K8 574 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 PCNX1Q96RV3 2341 aa9.4□□□□□ -0.9
PCDHGC4-201ENST00000306593 APOA2P02652 100 aa9.4□□□□□ -0.91
PCDHGC4-201ENST00000306593 CRYGSP22914 178 aa9.4□□□□□ -0.91
PCDHGC4-201ENST00000306593 DNM1P46Q6ZS02 220 aa9.4□□□□□ -0.91
PCDHGC4-201ENST00000306593 BHLHA15Q7RTS1 189 aaPredicted RBP9.4□□□□□ -0.91
PCDHGC4-201ENST00000306593 SLC25A40Q8TBP6 338 aa9.4□□□□□ -0.91
PCDHGC4-201ENST00000306593 SLC39A7Q92504 469 aa9.4□□□□□ -0.91
PCDHGC4-201ENST00000306593 NABP1Q96AH0 204 aa9.4□□□□□ -0.91
PCDHGC4-201ENST00000306593 TVP23CQ96ET8 276 aa9.4□□□□□ -0.91
PCDHGC4-201ENST00000306593 PNRC2Q9NPJ4 139 aaKnown RBP9.4□□□□□ -0.91
PCDHGC4-201ENST00000306593 PLSCR2Q9NRY7 297 aa9.4□□□□□ -0.91
PCDHGC4-201ENST00000306593 RALGAPA1Q6GYQ0 2036 aa9.4□□□□□ -0.91
PCDHGC4-201ENST00000306593 A0A1W2PR80 420 aa9.4□□□□□ -0.91
PCDHGC4-201ENST00000306593 MASP2O00187 686 aa9.4□□□□□ -0.91
PCDHGC4-201ENST00000306593 CDIPTO14735 213 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms