RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 C19orf67A6NJJ6 358 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 CD80P33681 288 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 PLPPR5Q32ZL2 321 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 NRN1LQ496H8 165 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 ETV3LQ6ZN32 361 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 STXBP6Q8NFX7 210 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 MYOZ3Q8TDC0 251 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 SPACA5Q96QH8 159 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 SNRPGP15A8MWD9 76 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 FUCA1P04066 466 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 FCN2Q15485 313 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 STPG3Q8N7X2 389 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 ZNF519Q8TB69 540 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 SF3B6Q9Y3B4 125 aaKnown RBP7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 CSPG4Q6UVK1 2322 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 DHRS7CA6NNS2 312 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 SPRY1O43609 319 aaPredicted RBP7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 TGFBR1P36897 503 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 CD96P40200 585 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 GPR6P46095 362 aaPredicted RBP7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 WNT3P56703 355 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 BAK1Q16611 211 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 COX19Q49B96 90 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 FAM219AQ8IW50 185 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 TMEM105Q8N8V8 129 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 OR10A7Q8NGE5 316 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 OR1L6Q8NGR2 347 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 SH3BGRL3Q9H299 93 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 ZNF665Q9H7R5 613 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 OOEPA6NGQ2 149 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 MELTFP08582 738 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 RPS4Y1P22090 263 aaKnown RBP7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 ERVFRD-1P60508 538 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 SLC38A11Q08AI6 406 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 TMEM128Q5BJH2 165 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 TCTEX1D1Q8N7M0 179 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 GPR137Q96N19 417 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 HYAL3O43820 417 aaPredicted RBP7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 ZNF32P17041 273 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 PMCHP20382 165 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 ETV1P50549 477 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 SRSF9Q13242 221 aaKnown RBP eCLIP7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 OR2D2Q9H210 308 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 ZNF256Q9Y2P7 627 aaPredicted RBP7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 PTBP3O95758 552 aaKnown RBP7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 LOXL3P58215 753 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 CEBPEQ15744 281 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 PABPC1L2AQ5JQF8 200 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 CALHM1Q8IU99 346 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 RBM45Q8IUH3 476 aaKnown RBP7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 RNF115Q9Y4L5 304 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 IFITM5A6NNB3 132 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 LPAR6P43657 344 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 SULT1A1P50225 295 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 Q6ZPB1 254 aaPredicted RBP7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 ZNF429Q86V71 674 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 TECRQ9NZ01 308 aaKnown RBP7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 RNF7Q9UBF6 113 aa7.32□□□□□ -1.24
PCDHB1-201ENST00000306549 TFAP2AP05549 437 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 GZMHP20718 246 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 MRPS11P82912 194 aaKnown RBP7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 SLC35E4Q6ICL7 350 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 C9orf40Q8IXQ3 194 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 NAA60Q9H7X0 242 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 SIX6O95475 246 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 EFEMP2O95967 443 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 FOXO1Q12778 655 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 PDZD11Q5EBL8 140 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 PRSS45Q7RTY3 260 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 TBC1D26Q86UD7 250 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 MARCH1Q8TCQ1 289 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 NUDCD2Q8WVJ2 157 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 RAX2Q96IS3 184 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 FSCN3Q9NQT6 498 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 TMEM38BQ9NVV0 291 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 U3KQ87 197 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 M0R143 59 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 SBK3P0C264 359 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 HINT1P49773 126 aaPredicted RBP7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 OR5A2Q8NGI9 324 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 OR5H6Q8NGV6 325 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 OR4C12Q96R67 309 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 C11orf54Q9H0W9 315 aaPredicted RBP7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 C7orf72A4D263 438 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 SLC17A2O00624 439 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 ACAA1P09110 424 aaPredicted RBP7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 OR4E1P0C645 316 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 FAM106CPP0CH98 169 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 CCL3P10147 92 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 UBE2L3P68036 154 aaKnown RBP7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 LILRB4Q8NHJ6 448 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 SCNM1Q9BWG6 230 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 LRP12Q9Y561 859 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 IGKV3-7A0A075B6H7 116 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 A0A0U1RQV5 110 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 SEMG1P04279 462 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 ADRB1P08588 477 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 COX6CP09669 75 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 COX5BP10606 129 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 GUK1Q16774 197 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 228.6 ms